PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00045g01642.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | B3 | ||||||||
Protein Properties | Length: 1133aa MW: 129530 Da PI: 9.3672 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.6 | 9.5e-18 | 7 | 93 | 6 | 97 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 +p++++++ v+p +fa+++++++++ t++++d + rsW++ l +++ +++++GW+eF+ +n++kegD ++F+ ++ +++++ Peaxi162Scf00045g01642.1 7 IPKSSHAQIPQVIPTQFARRNKLNNRK-CTISMRD-EQRSWTFSL--YTSGRNTYFGRGWREFCIENRVKEGDRLMFEIVS-NGETP 88 566666666679*********999765.5*****9.679******..88888899***********************887.66668 PP EEEEE CS B3 93 vvkvf 97 v++++ Peaxi162Scf00045g01642.1 89 VFRFY 93 88776 PP | |||||||
2 | B3 | 46.4 | 7e-15 | 142 | 228 | 4 | 94 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 ++++++ ++ l+lp fa+++g+ +++ +++l +e+ rsW+v l r s ++ + +GWk+F +an+++ gD++ F+l++++ Peaxi162Scf00045g01642.1 142 STIQPYSIDHHFLYLPSVFAKTNGLFNRR-CEMILINEKWRSWSVHL--RPMSHHTGIYRGWKQFKEANDVQLGDTFKFELINNE 223 46799999***************887655.59***************..****99**************************9976 PP EE..EE CS B3 89 efelvv 94 e +vv Peaxi162Scf00045g01642.1 224 EL-PVV 228 66.555 PP | |||||||
3 | B3 | 43.2 | 7.2e-14 | 241 | 305 | 27 | 99 |
---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 g+ ++ +k+ ++ + g++W vk+ ++++ l++GW +Fv++++L+ gD++vF+++g++ef +v++f++ Peaxi162Scf00045g01642.1 241 GIREALDKEHVVLRRAGKKWLVKF--NGRQ----LEEGWGKFVEEHDLQLGDVLVFRHEGDMEF--KVTIFDS 305 55667788899999**********..8887....************************999999..9999986 PP | |||||||
4 | B3 | 45.5 | 1.4e-14 | 367 | 449 | 5 | 91 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++++ l++g ++lpk+fa ++g+ ++ + l+++de+ rsW+++l y+ + + ++ ++ W +F+ an+L++gD + +++++ + Peaxi162Scf00045g01642.1 367 TVKPYCLSNGYFRLPKDFAMANGLTNK-KCGLIIRDERQRSWNFRL-YTSY-SNVYVGGKWGKFCVANDLQVGDHIRCEVVSN-G 447 567999****************77644.347999************.5555.5667799***************998887763.4 PP E. CS B3 90 fe 91 ++ Peaxi162Scf00045g01642.1 448 EK 449 44 PP | |||||||
5 | B3 | 45.9 | 1e-14 | 643 | 725 | 6 | 99 |
..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 6 tpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 ++++ ++ l +p f+ ++ +g + ++ ++ + g++W vkl + ++ l++GW +F+++++L+ gD++vF+++g++e Peaxi162Scf00045g01642.1 643 IKPYIITNPVLKIPVGFL-NYlKGHE---QEHVVLRRAGKKWLVKL--NDHR----LEEGWGKFAEEHDLQLGDILVFRYEGDME 717 567777888899******.5545553...35677888*********..6666....**************************999 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 f v++f++ Peaxi162Scf00045g01642.1 718 F--DVSIFDS 725 9..9999986 PP | |||||||
6 | B3 | 39.3 | 1.2e-12 | 787 | 857 | 4 | 77 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77 ++++++ +++ l+lp fa+++g+k + +++l+de rsW+v+l k+++ + +t GW +F an+L+ + Peaxi162Scf00045g01642.1 787 STIKPYSISKAVLYLPMGFAKSNGLKIGK-CKMILKDEAHRSWSVQL--GKYGNNFGITCGWTQFRAANDLRGN 857 56789999***************998655.59***************..**********************965 PP | |||||||
7 | B3 | 48.6 | 1.5e-15 | 917 | 996 | 5 | 87 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SS CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgr 87 ++++++ ++ l+lp fa+++g+ +++ +++l de+ r+W+v l + +++++ +GWk+F kang+++gD+ F+l+++ Peaxi162Scf00045g01642.1 917 TIKPYTIANTVLYLPMAFAKSNGLLNRS--EMILVDEKRRTWTVLL--GPMGHQFIIKrGGWKRFMKANGVRVGDSYKFELINN 996 56899999999***********988555..8***************..7777776555399*******************9985 PP | |||||||
8 | B3 | 39.8 | 7.9e-13 | 1000 | 1070 | 18 | 99 |
--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 lp f+ ++ +g k+ + + + g++W vkl ++++ +++GW+eF+++++L++g ++vFk++g++ef v++f++ Peaxi162Scf00045g01642.1 1000 LPIGFL-KYlKGTKN---DHAVLRRAGKKWLVKL--NGHR----FEEGWEEFAEEHDLQSGNMLVFKHEGDMEF--EVTIFDS 1070 666777.44344433...4567789*********..7777....9***********************999999..9999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01019 | 4.9E-14 | 5 | 96 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.2E-15 | 9 | 93 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 7.8E-17 | 15 | 92 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 3.14E-16 | 18 | 93 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 12.393 | 18 | 95 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 5.03E-14 | 18 | 93 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 3.0E-18 | 133 | 231 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 5.69E-18 | 136 | 231 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.75E-17 | 138 | 232 | No hit | No description |
PROSITE profile | PS50863 | 12.548 | 139 | 233 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 4.1E-14 | 140 | 228 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 3.9E-13 | 142 | 230 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.7E-9 | 229 | 306 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.6E-10 | 241 | 305 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 8.63E-15 | 246 | 308 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 3.2E-16 | 249 | 319 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.942 | 251 | 306 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.2E-13 | 362 | 454 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.166 | 363 | 457 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 2.75E-16 | 363 | 455 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 6.1E-13 | 363 | 458 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.5E-12 | 367 | 453 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 5.93E-12 | 369 | 439 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 1.6E-22 | 631 | 728 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.75E-20 | 633 | 728 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 4.74E-15 | 637 | 724 | No hit | No description |
PROSITE profile | PS50863 | 13.451 | 638 | 726 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.7E-14 | 639 | 726 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.2E-11 | 643 | 725 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 6.47E-14 | 779 | 858 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 8.8E-14 | 779 | 858 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.06E-10 | 783 | 855 | No hit | No description |
PROSITE profile | PS50863 | 9.178 | 784 | 878 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.9E-6 | 784 | 873 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.7E-10 | 786 | 857 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.5E-18 | 907 | 997 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 3.14E-18 | 908 | 997 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.26E-15 | 912 | 1006 | No hit | No description |
PROSITE profile | PS50863 | 12.999 | 913 | 1008 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 5.4E-14 | 914 | 1003 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.1E-14 | 917 | 997 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 4.4E-16 | 999 | 1073 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 3.92E-14 | 1000 | 1073 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.9E-9 | 1000 | 1070 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.7E-4 | 1004 | 1071 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 11.632 | 1017 | 1071 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1133 aa Download sequence Send to blast |
MQQKNQIPKS SHAQIPQVIP TQFARRNKLN NRKCTISMRD EQRSWTFSLY TSGRNTYFGR 60 GWREFCIENR VKEGDRLMFE IVSNGETPVF RFYGKGNAPL QPRRKKTNLD VQSNGIVNSY 120 TTAPKAQASA SISANANPHF VSTIQPYSID HHFLYLPSVF AKTNGLFNRR CEMILINEKW 180 RSWSVHLRPM SHHTGIYRGW KQFKEANDVQ LGDTFKFELI NNEELPVVYF HCKYAGKDAP 240 GIREALDKEH VVLRRAGKKW LVKFNGRQLE EGWGKFVEEH DLQLGDVLVF RHEGDMEFKV 300 TIFDSSHCDR ELPEHLQEEA KVRTVVGASK KVVKDKPNPR VASSSEAFRC AEASTYNHVG 360 QSHVEFTVKP YCLSNGYFRL PKDFAMANGL TNKKCGLIIR DERQRSWNFR LYTSYSNVYV 420 GGKWGKFCVA NDLQVGDHIR CEVVSNGEKP IWKFHDSRGS PSLKPEIKKN NLDDKRISDK 480 GLHFQEQTDL KIKSSNVTAP KSQISASTSS DDANPYFIST IKPYIITNTV LFMKANGVQV 540 GDNYKFELIN NGSDGSKPIA YFYCEYFFVS LKFHDTINLG GSPLLQPEVK KNSLDDIRIS 600 DKGLHFQEQT DFRIKTSDMT ASISQVFAST SADDANPHFI STIKPYIITN PVLKIPVGFL 660 NYLKGHEQEH VVLRRAGKKW LVKLNDHRLE EGWGKFAEEH DLQLGDILVF RYEGDMEFDV 720 SIFDSSQCDR DYAKHLQEAA EAHTVEETSK KFNTDTPNPI IMSSSKAFAE AATHNPSGQD 780 DLPYFISTIK PYSISKAVLY LPMGFAKSNG LKIGKCKMIL KDEAHRSWSV QLGKYGNNFG 840 ITCGWTQFRA ANDLRGNPSL QPEVKKKTLD SKRIPDKGLH FQVHTDLRIK TSDVTVPRSK 900 VAAPTSADDA NPHFVSTIKP YTIANTVLYL PMAFAKSNGL LNRSEMILVD EKRRTWTVLL 960 GPMGHQFIIK RGGWKRFMKA NGVRVGDSYK FELINNGPKL PIGFLKYLKG TKNDHAVLRR 1020 AGKKWLVKLN GHRFEEGWEE FAEEHDLQSG NMLVFKHEGD MEFEVTIFDS NHCEREYAEY 1080 LHEQEQDAHT FEEKPNTRIM LSSKDFHHAE EAHIVNNTSK KFESQSKILR VHN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA322 | 15 | 171 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 2e-40 | B3 family protein |