PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00042g00041.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 260aa    MW: 30397.1 Da    PI: 4.7466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00042g00041.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.7e-20109159255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  Peaxi162Scf00042g00041.1 109 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFNTAEEAAMAYDKAALRIRG 159
                               7********.**********3...2234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.5E-32108168IPR001471AP2/ERF domain
SMARTSM003806.4E-37109173IPR001471AP2/ERF domain
PfamPF008471.2E-14109159IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-24109169IPR016177DNA-binding domain
PROSITE profilePS5103223.907109167IPR001471AP2/ERF domain
CDDcd000181.32E-29109167No hitNo description
PRINTSPR003674.1E-11110121IPR001471AP2/ERF domain
PRINTSPR003674.1E-11133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MILLEKNQQL EVASREEILE NVWANFISKN EAHERETVDE CSEKWKELPF LERLPSLGRW  60
MSMGAETWEE HLDGIIPPSH DEKQSSDAST CKNENVKALE NKKVMVTRHY RGVRRRPWGK  120
YAAEIRDSSR KGARVWLGTF NTAEEAAMAY DKAALRIRGP KAYLNFPLET VERATGIISY  180
PEREWTFPSS LYPGWDESIS NSRKRVSRDW NMYEDLEIII NQPVEKRIMR SWEEEFQSDL  240
DILEFEDLGS DYLDSLLSSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-27108168161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A6e-27108168464ATERF1
3gcc_A6e-27108168464ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755141e-57HG975514.1 Solanum lycopersicum chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019246712.11e-134PREDICTED: ethylene-responsive transcription factor ERF091-like
SwissprotO495151e-40ERF91_ARATH; Ethylene-responsive transcription factor ERF091
TrEMBLA0A1J6IFY51e-133A0A1J6IFY5_NICAT; Ethylene-responsive transcription factor erf091
STRINGXP_009776179.11e-130(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112371823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-32ERF family protein