PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00040g00326.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HD-ZIP
Protein Properties Length: 703aa    MW: 76928.5 Da    PI: 5.7605
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00040g00326.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.82.8e-1632701856
                              HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                              +F++n++p+++ reeLAkklg++ +qVk+WFqNrR+ +k
  Peaxi162Scf00040g00326.1 32 AFKQNPHPDEKIREELAKKLGMDNKQVKFWFQNRRTHMK 70
                              7**********************************9988 PP
2START174.75.8e-552174372203
                               HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S CS
                     START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla 77 
                               la +a++el+++a+ +ep+Wv+s     e +  +e+++ f++  +     +++ea +as++v+ ++ +lve+++d++ +W e++ 
  Peaxi162Scf00040g00326.1 217 LAVAAMNELLRLAEIGEPLWVRSLdgggETLSLEEYISAFTPCAGikpgdFTTEATKASAIVIINSLTLVETIMDSR-RWVEMFS 300
                               6789**********************9999999*******9988899**9***************************.******* PP

                               ....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEE CS
                     START  78 ....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSg 151
                                   k ++ +viss       g+lql+++e+q+ls lvp R++ f+R+++q+ +g w++vdvSvds q+ ++  ++  +++lpSg
  Peaxi162Scf00040g00326.1 301 civgKTSVADVISSSsvgswsGTLQLIQTEFQVLSDLVPvRNVKFLRFCKQHAEGLWAVVDVSVDSIQEGSQPGEIGNCRRLPSG 385
                               ****99*******99999****************************************************9777899******** PP

                               EEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXX CS
                     START 152 iliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrq 203
                               ++i++++nghskvtw+eh+++++ ++h l+r+lv++gl +ga++w+atlqr 
  Peaxi162Scf00040g00326.1 386 CVIQDMPNGHSKVTWIEHMEYNETVVHHLYRPLVRNGLGFGAQRWMATLQRM 437
                               **************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003895.0E-82576IPR001356Homeobox domain
CDDcd000865.99E-143173No hitNo description
Gene3DG3DSA:1.10.10.606.3E-153178IPR009057Homeodomain-like
SuperFamilySSF466896.84E-133172IPR009057Homeodomain-like
PfamPF000468.8E-143270IPR001356Homeobox domain
PROSITE profilePS5007114.1073372IPR001356Homeobox domain
PROSITE patternPS0002704770IPR017970Homeobox, conserved site
PROSITE profilePS5084838.889207443IPR002913START domain
SuperFamilySSF559611.51E-29208438No hitNo description
CDDcd088759.04E-106211439No hitNo description
SMARTSM002342.3E-38216440IPR002913START domain
PfamPF018521.1E-47217437IPR002913START domain
SuperFamilySSF559613.11E-5475694No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    Send to blast
MAAGQSDMNE KGESSNHVVN GRASEDENES SAFKQNPHPD EKIREELAKK LGMDNKQVKF  60
WFQNRRTHMK SHSGKHERGL LKQQNDQLRI EKIALEEAMR NPICNRCGSP ASIVDIDADE  120
HQATIEHERL KNEVERITLL AKRLLVPLVS LEGSMHSVMA NSAVGINGGI NSVETQLPTA  180
FDLNKDPPSP LPVIPPQPTP SLANVDVSYD KSKLMDLAVA AMNELLRLAE IGEPLWVRSL  240
DGGGETLSLE EYISAFTPCA GIKPGDFTTE ATKASAIVII NSLTLVETIM DSRRWVEMFS  300
CIVGKTSVAD VISSSSVGSW SGTLQLIQTE FQVLSDLVPV RNVKFLRFCK QHAEGLWAVV  360
DVSVDSIQEG SQPGEIGNCR RLPSGCVIQD MPNGHSKVTW IEHMEYNETV VHHLYRPLVR  420
NGLGFGAQRW MATLQRMSEF MAVMMSPVDA TGDQAVVCSS GRRSIAMLAQ RMARSFCGGV  480
CATIHKWDPI QKANGEDAKL MMRKNIGDPA GEHTGVILSA TETIWLPVKQ DRLIEFLLNK  540
EKRSQWDVLS NSDSMQQMVY IAKGQNLDNS ISLFRPNEDD TNTENSKLIL QDTSSDATGF  600
LLVYAAVDTS AMKVVMDGGD SSSVAFLPSG ISIVPDCFQD FSAATNSTGT SHGFSCSGSL  660
VTIGFQILAN SSPTAKLTIQ SVEKVNDLIA RTINGIKAAF KCK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016449095.10.0PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
TrEMBLA0A1S3YA530.0A0A1S3YA53_TOBAC; homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
STRINGXP_009771833.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1531837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.10.0homeodomain GLABROUS 1