PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00030g00224.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GeBP
Protein Properties Length: 384aa    MW: 42564.6 Da    PI: 5.6979
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00030g00224.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573117.38.3e-37161258298
                    DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehd 85 
                               lfqrlwse+Dei++L+G+id+k k++++p+ d++af+ef+kks++++vsk ql +KirrLKkK++++  k +k +ke +fsk+h+
  Peaxi162Scf00030g00224.1 161 LFQRLWSEDDEIAILKGMIDYKLKKKSDPVGDLNAFHEFIKKSLHVDVSKAQLQDKIRRLKKKYENNAVKeRKGKKERTFSKAHE 245
                               79**************************************************************9987775888899******** PP

                    DUF573  86 qkifelskkiWgs 98 
                               qk+++lskkiWg+
  Peaxi162Scf00030g00224.1 246 QKAYDLSKKIWGK 258
                               ***********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.1E-33162257IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MAKNQHEEQD SGDEVEESSP ENAESESESG SGSETEPEPE QPAKKPPVSA PKKPPPHDSS  60
SESEESESES ESGSGRPTQQ PNVKPISSKP MDTKKSGSKT ITTAPTKPSA GTGAKRPAAA  120
TAEAESEEGG EKESKRLKKK PEKKVEPLVQ KPPNEDVKRQ LFQRLWSEDD EIAILKGMID  180
YKLKKKSDPV GDLNAFHEFI KKSLHVDVSK AQLQDKIRRL KKKYENNAVK ERKGKKERTF  240
SKAHEQKAYD LSKKIWGKEK NVVEEVVDRV IENGTGKKGE SKSGVLDDGV KEEEEKKKVG  300
DEVENVVEVG LRNLSFLVSC GTSLDAMEKW LEENSGLVSV EKRNEMNGKL SSLKVVEMDL  360
LAKRYQLINE QVSLVSEAMK ALEN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016473271.11e-120PREDICTED: mediator-associated protein 1-like
TrEMBLA0A1S4A9L41e-118A0A1S4A9L4_TOBAC; mediator-associated protein 1-like
STRINGXP_009623906.11e-117(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.11e-30DNA-binding storekeeper protein-related transcriptional regulator