PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00029g00319.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Nin-like

Protein Properties

Length: 945aa MW: 107347 Da PI: 6.2953

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00029g00319.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	47.8	2.9e-15	770	814	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is +l+++F +++ dAAk+Lgv ++LKr CR y I RWP+ k Peaxi162Scf00029g00319.1 770 GISRGVLEEQFGKKLSDAAKSLGVARSTLKRMCRDYDIYRWPRSK 814 688899************************************865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.593	752	841	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.60	6.2E-4	762	806	IPR009057	Homeodomain-like
Pfam	PF02042	2.3E-12	775	814	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.11E-15	852	942	No hit	No description
Pfam	PF00564	1.0E-15	862	943	IPR000270	PB1 domain
SMART	SM00666	4.1E-16	862	944	IPR000270	PB1 domain
PROSITE profile	PS51745	19.662	862	945	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	3.1E-15	864	942	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 945 aa Download sequence Send to blast
MKFSHKKQGD GSNRWVFWTQ RNDDELNHVK SLFPVLRDSI LPPATNGNCQ VNRCIVKNLV 60 ELLDLQDQPF ALNGKLHEGL WAYRRVCLHT IASLDATEIN EAKRIHFHGR PARVFKSGMP 120 EFSPHVRYYY MDEYPLRKFA MCLGVGSYWT LPVFTSSRDH CVGVLEYAFE ANECLDLCSI 180 LDSFIDNHRI LKTFLTTADQ PFALNGKLHE GLWAYRRVCL HTIASLDATE INEAKRIHFH 240 GRPARVFKSG MPEFSPHVRY YYMDEYPLRK FAMCLGVGSY WTLPVFTSSR DHCVGVLEYA 300 FEANECLDLC SILDSFIDNH RILKTMGLAL IPSWLAYPQE IQEVWEQELA QVKEALEVTC 360 KTHKLPFAQT WIPVFDSSKM EMLITSPPTK YWSEDITSVE FMAVSDLHHV RIGQGLVGKV 420 LSSKGSCFCK DITQLSIEFY PLVPIARCAK FTAYFAMLVK PRSASHVVLE FFLPQDESLN 480 GNPQSFLSKL LATIKEQLPS FFLDSGPSLF VEVIRTAGAD EIDSFEIGQP QPMVRSKGKE 540 KLMQFNSFNE ESVDLGPSSS TGVVAHSMEI VKDSSRIDDI ARSQKIFESE NREETVLPNS 600 VQRQGVEEAD AVDKESNFVQ LKVNNVAYTD SDKFTTFIVD SEQNFQQNLF TDHKASLDEE 660 LNSFEIGLHQ LSSMVQYDAN IQLFDFDPSS SSDFEEIVNV DYGWDTRMNL QSNNRREPTQ 720 PDVAHQQRLK EADAGDKQRH SISMHAKDST ISHNCSEKHK RIKRMEKEYG ISRGVLEEQF 780 GKKLSDAAKS LGVARSTLKR MCRDYDIYRW PRSKSANDIC SLSKSKSVKG VKMKSLNSSQ 840 EDLQPHAGLS IGMATTAALD NTMSIKVTYK DVTVKFPLSL SSGKIDLEAE VEKRLKIPIG 900 SSSIKYEDED NDWISITCDS DLEYGIHTLR SSGRTTMKMI VEPLN

Sequence ? help Back to Top

Protein Sequence Length: 945 aa Download sequence Send to blast

MKFSHKKQGD GSNRWVFWTQ RNDDELNHVK SLFPVLRDSI LPPATNGNCQ VNRCIVKNLV  60
ELLDLQDQPF ALNGKLHEGL WAYRRVCLHT IASLDATEIN EAKRIHFHGR PARVFKSGMP  120
EFSPHVRYYY MDEYPLRKFA MCLGVGSYWT LPVFTSSRDH CVGVLEYAFE ANECLDLCSI  180
LDSFIDNHRI LKTFLTTADQ PFALNGKLHE GLWAYRRVCL HTIASLDATE INEAKRIHFH  240
GRPARVFKSG MPEFSPHVRY YYMDEYPLRK FAMCLGVGSY WTLPVFTSSR DHCVGVLEYA  300
FEANECLDLC SILDSFIDNH RILKTMGLAL IPSWLAYPQE IQEVWEQELA QVKEALEVTC  360
KTHKLPFAQT WIPVFDSSKM EMLITSPPTK YWSEDITSVE FMAVSDLHHV RIGQGLVGKV  420
LSSKGSCFCK DITQLSIEFY PLVPIARCAK FTAYFAMLVK PRSASHVVLE FFLPQDESLN  480
GNPQSFLSKL LATIKEQLPS FFLDSGPSLF VEVIRTAGAD EIDSFEIGQP QPMVRSKGKE  540
KLMQFNSFNE ESVDLGPSSS TGVVAHSMEI VKDSSRIDDI ARSQKIFESE NREETVLPNS  600
VQRQGVEEAD AVDKESNFVQ LKVNNVAYTD SDKFTTFIVD SEQNFQQNLF TDHKASLDEE  660
LNSFEIGLHQ LSSMVQYDAN IQLFDFDPSS SSDFEEIVNV DYGWDTRMNL QSNNRREPTQ  720
PDVAHQQRLK EADAGDKQRH SISMHAKDST ISHNCSEKHK RIKRMEKEYG ISRGVLEEQF  780
GKKLSDAAKS LGVARSTLKR MCRDYDIYRW PRSKSANDIC SLSKSKSVKG VKMKSLNSSQ  840
EDLQPHAGLS IGMATTAALD NTMSIKVTYK DVTVKFPLSL SSGKIDLEAE VEKRLKIPIG  900
SSSIKYEDED NDWISITCDS DLEYGIHTLR SSGRTTMKMI VEPLN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016440586.1	0.0	PREDICTED: protein NLP7-like isoform X1
TrEMBL	A0A1S3XKX9	0.0	A0A1S3XKX9_TOBAC; protein NLP7-like isoform X1
STRING	XP_009783714.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13981	7	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	7e-36	Nin-like family protein