PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00026g00312.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 504aa MW: 55384.5 Da PI: 5.2581

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00026g00312.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.7	2.4e-09	320	368	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Peaxi162Scf00026g00312.1 320 NSHSLAERVRREKISERMKYLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 368 58***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	3.92E-10	315	372	No hit	No description
SuperFamily	SSF47459	2.62E-17	315	386	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.51	317	367	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.2E-17	318	384	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.0E-6	320	368	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	3.2E-10	323	373	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence Send to blast
MDLSSKNDIE QQKRNDDAMN FQSSNMSLDW QISGSNFPNS NPLVDSICPT IWDRPTNSPN 60 LSYYGSNNVQ INPTSTTNPH EIVAMLKGGM FVPPCLGMLP QSLPQLPADS GFIERAARFS 120 CFSAGNLSDM MNPFNVPESM KPCYRGLAET WRPEEVSARN GLNSPSAVNP QKQQLGNEVE 180 SSKDVSLPNE HGTNEESPLK NEKRNDNIAR SQDEGKESVG LLGNESDEAE CSGRQEEMEG 240 AGSRKRKRYG QETELDQMKR VKQPSAERAQ DQTETQKGEQ NLKSTASKPG GNNGKQGSQA 300 SDPPKEDYIH VRARRGQATN SHSLAERVRR EKISERMKYL QDLVPGCNKV TGKAVMLDEI 360 INYVQSLQRQ VEFLSMKLAT VNPQLDFNID GLLAKDILQS RAGPSSALAF PPDMTIPFTS 420 LHALQSGLLQ SGFPGMGYRT DASSRSINSH FASMSGGYKD PSSQVPNAWD DQLHNVVDMG 480 VNSNVSLNNQ DLSSLPPGQM KAEP

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence Send to blast

MDLSSKNDIE QQKRNDDAMN FQSSNMSLDW QISGSNFPNS NPLVDSICPT IWDRPTNSPN  60
LSYYGSNNVQ INPTSTTNPH EIVAMLKGGM FVPPCLGMLP QSLPQLPADS GFIERAARFS  120
CFSAGNLSDM MNPFNVPESM KPCYRGLAET WRPEEVSARN GLNSPSAVNP QKQQLGNEVE  180
SSKDVSLPNE HGTNEESPLK NEKRNDNIAR SQDEGKESVG LLGNESDEAE CSGRQEEMEG  240
AGSRKRKRYG QETELDQMKR VKQPSAERAQ DQTETQKGEQ NLKSTASKPG GNNGKQGSQA  300
SDPPKEDYIH VRARRGQATN SHSLAERVRR EKISERMKYL QDLVPGCNKV TGKAVMLDEI  360
INYVQSLQRQ VEFLSMKLAT VNPQLDFNID GLLAKDILQS RAGPSSALAF PPDMTIPFTS  420
LHALQSGLLQ SGFPGMGYRT DASSRSINSH FASMSGGYKD PSSQVPNAWD DQLHNVVDMG  480
VNSNVSLNNQ DLSSLPPGQM KAEP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019228486.1	0.0	PREDICTED: transcription factor bHLH49-like
TrEMBL	A0A314KMY7	0.0	A0A314KMY7_NICAT; Transcription factor bhlh49
STRING	XP_009776786.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2871	21	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-106	bHLH family protein