PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00024g02317.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 274aa    MW: 30732.3 Da    PI: 5.2236
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00024g02317.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.24.5e-06164195437
                               HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS- CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskK 37 
                               ++  rEr RR+++N++f+eL ++l + +   p++K
  Peaxi162Scf00024g02317.1 164 SKACRERVRREKLNERFSELCSVLEPgR---PAEK 195
                               6789****************99999877...5555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.81E-4158183No hitNo description
SuperFamilySSF474594.8E-5161191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MNQLDSIPHN NWDDFIDFNT VLNWNDHTHN QRGCYMPSYN GGFGGGEYGK QVMVDHLCHT  60
VKDSLHPYGF GSSNQTDPIG APISNGNGKP CDLGEDSEGI FSSNGPVFPP PNEMLEEGFS  120
LPEWRRTVTA LDAPISSATF QEECVETECL RKRARNESCS KQGSKACRER VRREKLNERF  180
SELCSVLEPG RPAEKNELRE EKLTLKADKE RMEQELKAMA APPASFIPPH PAAYQPAVNK  240
MAVFPSYGYV PMWQYLPPST RDTSQDHELR PPAA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755212e-81HG975521.1 Solanum lycopersicum chromosome ch09, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775135.14e-84PREDICTED: transcription factor bHLH104 isoform X1
RefseqXP_016457771.14e-84PREDICTED: transcription factor bHLH104-like isoform X1
TrEMBLA0A1S3YZM28e-83A0A1S3YZM2_TOBAC; transcription factor bHLH104-like isoform X1
TrEMBLA0A1U7WLJ48e-83A0A1U7WLJ4_NICSY; transcription factor bHLH104 isoform X1
STRINGXP_009775135.11e-83(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47622132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.24e-52bHLH family protein