PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00021g00069.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 306aa    MW: 34044.5 Da    PI: 8.809
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00021g00069.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.1e-203282256
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                              ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  Peaxi162Scf00021g00069.1 32 KFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 82
                              799******.7*********43...36**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.81E-203290IPR016177DNA-binding domain
PfamPF008472.6E-153282IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.6E-293290IPR001471AP2/ERF domain
CDDcd000183.43E-323291No hitNo description
SMARTSM003808.0E-353295IPR001471AP2/ERF domain
PROSITE profilePS5103220.5083289IPR001471AP2/ERF domain
PRINTSPR003673.1E-73344IPR001471AP2/ERF domain
PRINTSPR003673.1E-75571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MANSEITKIT ITPNTTTKSP QQQPNKSILT RKFVGVRQRP SGRWVAEIKD SSQRVRLWLG  60
TYDTPEEAAR AYDEAARALR GENARTNFAS SITTNPNSDD ESINNMLQSN GGISDHSKHG  120
LSFSSIKAKL SKNLQSIMAR NSENKSSSKN RVSDHFTFAR IFHFKNNYQY QQNHHHVDMK  180
KIEQVVQPSI RVPHVTSDIS TNDPYSSWDN SSVSDCSSEW SAFRQLGLDS DNGSLSDASE  240
FFVGDPMMGW VSSPDIMSGG SSSSSEGSRS KRCVVGSGKE AEAVRALSRC SEGFWELRDF  300
RTGVWL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1432881471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019229180.11e-116PREDICTED: ethylene-responsive transcription factor ERF010-like
TrEMBLA0A314KLN41e-115A0A314KLN4_NICAT; Ethylene-responsive transcription factor rap2-11
STRINGXP_009762762.11e-113(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125641721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-17related to AP2 11