PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00016g02026.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 277aa    MW: 30300.6 Da    PI: 7.6207
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00016g02026.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.7e-1374120555
                               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               h   Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk L+
  Peaxi162Scf00016g02026.1  74 HILTERERRKKMRNMFSNLHALLPQL----PPKADKSTIVDEAVNYIKTLE 120
                               7789*********************6....39****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.27269119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-1571137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-1473130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.10E-1474124No hitNo description
PfamPF000101.7E-1074120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-975125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00568217273No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MNEGNDHDRI IWNNQGWLVT NSDNLGGTIE KSEAAAKKRK AAAGGKTTKN GSNGSGEEKC  60
GGGGVEGESD HEIHILTERE RRKKMRNMFS NLHALLPQLP PKADKSTIVD EAVNYIKTLE  120
NTLQNLQKHK LERLHGMAAA IINYDPSIIA SQKLLGSDMS SFETFLADQG STSNSAAITP  180
TNKTSASPPL IPGLIPAVFQ TWTSPNVILN VCGDEAQISI CCLKKHGLLS SICYVLEKYK  240
IEMVSAQVSS DHYRSMFMIQ THVSPLILHP LSPYLFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2375862e-34AC237586.1 Populus trichocarpa clone POP031-J10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009627647.11e-112PREDICTED: transcription factor bHLH95-like
RefseqXP_016439647.11e-112PREDICTED: transcription factor bHLH95-like
TrEMBLA0A1S3XIZ41e-110A0A1S3XIZ4_TOBAC; transcription factor bHLH95-like
STRINGXP_009627647.11e-111(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-48bHLH family protein