PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00015g10132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | Dof | ||||||||
Protein Properties | Length: 315aa MW: 34758.7 Da PI: 9.9454 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 120.6 | 5.5e-38 | 70 | 130 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+ Peaxi162Scf00015g10132.1 70 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRST 130 67899*****************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-31 | 53 | 123 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.6E-32 | 73 | 128 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.292 | 74 | 128 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 76 | 112 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence Send to blast |
MAFSSAPIYL DPPNWQQQQQ QQLGVANESR SSQLSPTMPP PPAIGGGGTC STRPGSMADR 60 ARISKIITQP ETALKCPRCE STNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRSVPVG 120 GGCRRNKRST KGSTRSKSPG RGEKRNISPI STNATTSNNI IMSHLPTPPP HNLSFLTTPL 180 HNLSDFSSTE NRLNFGGIIH PQGGTSDHHQ MSLSARFADQ FRFQQMQQFP FFSALEHPSN 240 LYQFQAVEYD HMGATNSIGS KAFESDEVTN VKVEENKSAN NSQGLNLSRN NVGVASNQFW 300 TDISGYNSTS TSQLL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009619177.1 | 1e-118 | PREDICTED: dof zinc finger protein DOF3.6-like | ||||
TrEMBL | A0A1S3YKE3 | 1e-114 | A0A1S3YKE3_TOBAC; dof zinc finger protein DOF3.6-like | ||||
STRING | XP_009619177.1 | 1e-117 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02460.1 | 3e-39 | Dof family protein |