PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00015g00067.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 372aa    MW: 40961.6 Da    PI: 8.4815
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00015g00067.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77.1e-193081156
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                              +++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a++ l+g+
  Peaxi162Scf00015g00067.1 30 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGA 81
                              6799******.7*********....4456*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.04E-303088No hitNo description
PfamPF008473.5E-133080IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-293188IPR001471AP2/ERF domain
SMARTSM003801.6E-353194IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-203189IPR016177DNA-binding domain
PROSITE profilePS5103220.4683188IPR001471AP2/ERF domain
PRINTSPR003671.2E-73243IPR001471AP2/ERF domain
PRINTSPR003671.2E-75470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MKQKAATTQT PAQPSDGIRT RRKPSSRGHP RFVGVRQRPS GRWVAEIKDS LQKVRLWLGT  60
FDTAEDAARA YDQAARTLRG ANARTNFELP ASESQQGSIL ENSEPFNFEE ACRTDEPENG  120
LVGALKAKLF NSKSKRSYIQ AYASTTSQAP IIKPPLPSFE NKKTSPPTGQ AFTLARGLMS  180
NVETEKLPKR DTHHVNNIGK GKINSDNLSR GISHDQHNHN LDYISLITRD NPMISQWQNQ  240
WNSGTNSALM WANEQGRLPW GEPQMSRSHD EVSFSTTNNM NSGSIFGGGN STTSTWPMSV  300
SVLGTSEPTV DLSSFGEVDI INTPMMMPHM NGLAQQAAST TPEHQMMQFE NGLWGAGENA  360
AWDPFLLSSV LG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1529871271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009762261.10.0PREDICTED: ethylene-responsive transcription factor CRF4-like
TrEMBLA0A1U7VB960.0A0A1U7VB96_NICSY; ethylene-responsive transcription factor CRF4-like
STRINGXP_009589605.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118691819
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-19related to AP2 11