PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00013g00537.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 399aa    MW: 44279.7 Da    PI: 9.3041
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00013g00537.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.41.7e-15229275455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                hn+ ErrRRdriN+++ +L++++P+a      K +Ka++L ++++Y+k Lq
  Peaxi162Scf00013g00537.1 229 VHNQSERRRRDRINEKLKTLQKMVPNA-----SKTDKASMLDEVIKYLKLLQ 275
                               5*************************9.....7****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.61E-16221279No hitNo description
Gene3DG3DSA:4.10.280.101.5E-16222295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.282225274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.2E-18228298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-13229275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-15231280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MSLPTRNFWH QSQEQVTEEE EENRYRHVHN KQNPNHLVPV SKYEVAELTW EKGNLNMHRL  60
GGIVLNDQTK QTFGRASDTL ESIVHQATSN KQNYSPSNLK GGDSTGNIAT SSGQWRESSA  120
VKQQTTAGLV KKRMRSDSDP QLYGSGRSVG ECSKNIVIDQ QTERSANCAS DRDNDTTMIT  180
WPCSLDESSR SFKSKANEDS GWHGRPENKE KEHETKGSNP SKRNRTAAVH NQSERRRRDR  240
INEKLKTLQK MVPNASKTDK ASMLDEVIKY LKLLQTEVQL ISSARNMEYS QMMMMQPHIQ  300
MPLLARMGMN SLGMAPGMLN MAALARAATP HQSLTAPFIY PTSSIATSCP PFMSPAFAMA  360
PTVPTPPQAS GDACANKAAV APSATNSFPF NDPYSAFLA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1233238ERRRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009801833.11e-164PREDICTED: transcription factor PIF7
TrEMBLA0A1U7YFB61e-163A0A1U7YFB6_NICSY; transcription factor PIF7
STRINGXP_009801833.11e-164(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54371732
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.12e-37bHLH family protein