PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00007g02128.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 435aa    MW: 50704.9 Da    PI: 7.38
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00007g02128.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.12.6e-151461148
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                              rg+WT+eEd +l  +v+++G  +W+  +++ g+ R++k+c++rw +yl
  Peaxi162Scf00007g02128.1 14 RGAWTEEEDNKLRAYVERFGHWNWRQLPKYAGLMRCGKSCRLRWMNYL 61
                              89******************99************************97 PP
2Myb_DNA-binding47.25.2e-1567112148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                               +g+ + eE +l+++++++lG++ W++Ia++++ gR+++++k+ w+++l
  Peaxi162Scf00007g02128.1  67 KGNYSNEEGQLIIKLHNELGNR-WSAIAEKLP-GRSDNDIKNQWHSHL 112
                               7899******************.*********.************986 PP
3Myb_DNA-binding54.82.1e-17219266148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                               rg+W++eEd++l  +v+++G ++W+  +r+ g+ R++k+c++rw +yl
  Peaxi162Scf00007g02128.1 219 RGSWSEEEDDKLRSYVERYGHPNWRQLPRYAGLMRCGKSCRLRWMNYL 266
                               89********************************************97 PP
4Myb_DNA-binding56.85.3e-18272316147
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +g+ + eE++l++++++qlG++ W+tIa++++ gR+++++k++w+ +
  Peaxi162Scf00007g02128.1 272 KGKYSHEEEQLIIKLHNQLGNR-WSTIAEKLP-GRSDNDIKNHWHAH 316
                               7899******************.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129423.327965IPR017930Myb domain
SuperFamilySSF466891.37E-2811108IPR009057Homeodomain-like
SMARTSM007173.5E-111363IPR001005SANT/Myb domain
PfamPF002495.6E-141461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.2E-211568IPR009057Homeodomain-like
CDDcd001672.21E-81661No hitNo description
SMARTSM007179.8E-1666114IPR001005SANT/Myb domain
PROSITE profilePS5129417.99766116IPR017930Myb domain
PfamPF002496.0E-1467112IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.4E-2469115IPR009057Homeodomain-like
CDDcd001675.43E-969112No hitNo description
PROSITE profilePS5129416.882214266IPR017930Myb domain
SuperFamilySSF466891.5E-29216313IPR009057Homeodomain-like
SMARTSM007172.3E-13218268IPR001005SANT/Myb domain
PfamPF002492.3E-15219266IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-22220273IPR009057Homeodomain-like
CDDcd001672.70E-9221266No hitNo description
PROSITE profilePS5129426.113267321IPR017930Myb domain
SMARTSM007176.8E-17271319IPR001005SANT/Myb domain
PfamPF002494.9E-16272316IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-24274320IPR009057Homeodomain-like
CDDcd001675.58E-10274317No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MVRTPSVDKN GVKRGAWTEE EDNKLRAYVE RFGHWNWRQL PKYAGLMRCG KSCRLRWMNY  60
LRPGLKKGNY SNEEGQLIIK LHNELGNRWS AIAEKLPGRS DNDIKNQWHS HLKKRAKTNS  120
YSSTLMEQMS TESSQSGSQS EQSCKLSELE ACDKKEVTSA AIDRLDSVPP VSLEVSSSSL  180
LNGIMDYWME EEDRMFRPSM ELLSIMVRTP SIDKSGMKRG SWSEEEDDKL RSYVERYGHP  240
NWRQLPRYAG LMRCGKSCRL RWMNYLRPGL KKGKYSHEEE QLIIKLHNQL GNRWSTIAEK  300
LPGRSDNDIK NHWHAHLKKR SKSNTNSSAI MMKQLIECSQ SESQDDEHSN SKFAEHDSFS  360
PIDSVQPVSS DVSSSSVLNG MDCWFEEDNH IFSSMEPLPD FFNFSWTKPI YNFQTEPFDH  420
YWTEAMDNFW TEPFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C1e-231232025128MYB TRANSFORMING PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111117LKKRAKT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that regulates freezing tolerance by affecting expression of CBF genes. {ECO:0000269|PubMed:24415840}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA), jasmonic acid (JA), salt (NaCl), ethylene and auxin (IAA) (PubMed:16463103). Down-regulated by cold treatment (PubMed:24415840). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:24415840}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009766826.15e-97PREDICTED: myb-related protein Myb4-like isoform X1
RefseqXP_016444431.15e-97PREDICTED: myb-related protein Myb4-like isoform X1
SwissprotQ9SJX82e-50MYB14_ARATH; Transcription factor MYB14
TrEMBLA0A1S3XWW61e-95A0A1S3XWW6_TOBAC; myb-related protein Myb4-like isoform X1
TrEMBLA0A1U7VPE41e-95A0A1U7VPE4_NICSY; myb-related protein Myb4-like isoform X1
STRINGXP_009766826.12e-96(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2487022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.14e-52myb domain protein 14
Publications ? help Back to Top
  1. Chen Y, et al.
    AtMYB14 Regulates Cold Tolerance in Arabidopsis.
    Plant Mol. Biol. Rep., 2013. 31: p. 87-97
    [PMID:24415840]