PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00007g01020.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HD-ZIP
Protein Properties Length: 724aa    MW: 79848.3 Da    PI: 5.5035
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00007g01020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-1952107156
                               TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                               +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R++ k
  Peaxi162Scf00007g01020.1  52 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELGRQLGLEPLQVKFWFQNKRTQTK 107
                               678899***********************************************998 PP
2START190.77.4e-602424621206
                               HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT- CS
                     START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetl 76 
                               ela +a++el+++a  +ep+W  s       +n+de+ ++f+++ +     +++ea+++++vv+m++ +lve+++d++  W+ ++
  Peaxi162Scf00007g01020.1 242 ELAVAAMEELIQMANMGEPLWLPSIdsgtYFLNEDEYARIFPRGIGpkpdgFKTEASKETAVVIMNHINLVEIFMDVN-HWSSMF 325
                               57899********************8877789***********999********************************.****** PP

                               S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSE CS
                     START  77 a....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpS 150
                                    ka tl+v+s+g      galq+++ae+q++sp  p Rd +fvRy++++ +g w+ivdv +d+ + +p+    +R++++pS
  Peaxi162Scf00007g01020.1 326 SnivsKAVTLDVLSTGvagnfnGALQVIFAEFQVPSPQIPtRDCYFVRYCKRSVDGIWAIVDVTLDHLRGNPT----ARCRRRPS 406
                               ************************************************************************6....******** PP

                               EEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                     START 151 giliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                               g+li++++ng+skv w+eh+d ++  +h ++++lv++gla+gak+w+a l+rqce+
  Peaxi162Scf00007g01020.1 407 GCLIQEMPNGYSKVAWIEHIDADDTAIHDIYKPLVNYGLAFGAKRWLAILDRQCER 462
                               ******************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-2136103IPR009057Homeodomain-like
SuperFamilySSF466899.61E-1940109IPR009057Homeodomain-like
PROSITE profilePS5007116.58449109IPR001356Homeobox domain
SMARTSM003893.0E-1850113IPR001356Homeobox domain
CDDcd000861.45E-1852110No hitNo description
PfamPF000462.5E-1752107IPR001356Homeobox domain
SuperFamilySSF559615.08E-34233464No hitNo description
PROSITE profilePS5084842.001233465IPR002913START domain
CDDcd088753.57E-121237461No hitNo description
SMARTSM002342.2E-55242462IPR002913START domain
PfamPF018523.5E-49243462IPR002913START domain
Gene3DG3DSA:3.30.530.201.8E-4338429IPR023393START-like domain
SuperFamilySSF559614.12E-22482714No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 724 aa     Download sequence    Send to blast
MEGQHHSMDM ASYTSESEFM LDQELDSKSG SDNQEGKSGD DEQVDANQRA KKKRYHRHTQ  60
HQIQEMEAFF KECPHPDDKQ RKELGRQLGL EPLQVKFWFQ NKRTQTKNHH EHNENALLRA  120
ENEKFKAENV QLREALNNAA LCPTCRCPTN NLGEMSFAEH SLKLENDRLT EEVHRISAIA  180
AKFVGKPVSS FNLYSPPVTP RPFDIGVQPY SAQHNVIGDE YGNGGERIIS GPTEAEKPFI  240
IELAVAAMEE LIQMANMGEP LWLPSIDSGT YFLNEDEYAR IFPRGIGPKP DGFKTEASKE  300
TAVVIMNHIN LVEIFMDVNH WSSMFSNIVS KAVTLDVLST GVAGNFNGAL QVIFAEFQVP  360
SPQIPTRDCY FVRYCKRSVD GIWAIVDVTL DHLRGNPTAR CRRRPSGCLI QEMPNGYSKV  420
AWIEHIDADD TAIHDIYKPL VNYGLAFGAK RWLAILDRQC ERLASAMATI IPNNDISNMV  480
ISTQEARKST LKLAERMVIS FCSGASATTA HQWTTLSGSG LDSDVRIMTR KSIDDPGKPS  540
GIVLSAATSF WLPICPERVF NFLRDENTRS KWDILSNGGI VQEMAHIANG RENGNCVSLL  600
RVTSENSSQS NMLILQESST DITGSFVVYA PIDVAAMNIV LGGGEPDYVA LLPSGFAILP  660
DGPPGNSGIT AGSGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIACTV DRIKASLLPE  720
AHDF
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009766038.10.0PREDICTED: homeobox-leucine zipper protein HDG2-like
RefseqXP_016447957.10.0PREDICTED: homeobox-leucine zipper protein HDG2-like
SwissprotQ94C370.0HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBLA0A1S3Y7I30.0A0A1S3Y7I3_TOBAC; homeobox-leucine zipper protein HDG2-like
TrEMBLA0A1U7VI760.0A0A1U7VI76_NICSY; homeobox-leucine zipper protein HDG2-like
STRINGXP_009766038.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9322491
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0homeodomain GLABROUS 2