PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00003g02333.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bZIP | ||||||||
Protein Properties | Length: 419aa MW: 45710.3 Da PI: 9.3961 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.6 | 2.6e-13 | 341 | 393 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r +r++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ e ++ + Peaxi162Scf00003g02333.1 341 RRRKRMIKNRESAARSRARKQAYTLELEAEVAKLKEINEELQKKQAEFIEMQK 393 689**************************************998777666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.3E-12 | 337 | 398 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 339 | 384 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.2E-11 | 341 | 397 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.27E-24 | 341 | 395 | No hit | No description |
SuperFamily | SSF57959 | 1.34E-9 | 341 | 389 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-12 | 341 | 396 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 344 | 359 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence Send to blast |
MGSYMNFKNF ADAPLTESNG GKLGSDNFPL ARQSSIYSLT FDEFQSTCGL GKDLGSMNLE 60 DLLKNIWTAE ESQALASSAG VGDGSMSGGN LQRQGSLTLP RTLSQKTVDD VWRDFQKETV 120 SSIDGSDTGR SNLVQRQSTL GEMTLEEFLV RAGVVREDMQ PAGDSNDVRF TGGLSQPSTT 180 NNGLNISFQQ PTQNPGMLSN QFAENNMLNV VSTTSSQPQA QQPQPLFSKQ MNVAFTSPIH 240 LGNTAQLASP GARAPRVSMS SPLVNTTNVQ GGDMHGGIKG LAGLRNGLTP AKRGSPGDQL 300 SPDMIVKSDL DSSSPSPSPY AFTEGGRGRR SCTSLEKVVE RRRKRMIKNR ESAARSRARK 360 QAYTLELEAE VAKLKEINEE LQKKQAEFIE MQKNQLMEKM NMPWGNKLRC LRRTLTGPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP050784 | 1e-142 | KP050784.1 Nicotiana tabacum cultivar Xianzi ABA responsive element binding factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009760513.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Refseq | XP_016441338.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X2 | ||||
Swissprot | Q9M7Q3 | 1e-102 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A1S3XN38 | 0.0 | A0A1S3XN38_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X2 | ||||
TrEMBL | A0A1U7V2A8 | 0.0 | A0A1U7V2A8_NICSY; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
STRING | XP_009760513.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA776 | 24 | 97 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 2e-91 | abscisic acid responsive elements-binding factor 3 |