PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00003g00523.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bZIP

Protein Properties

Length: 517aa MW: 57868.6 Da PI: 6.9718

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00003g00523.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32	2.7e-10	213	253	4	41
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+++NReAAr+sR+RKka++++Le+ + ++Le+e Peaxi162Scf00003g00523.1 213 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 253 6889************************9733355555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	9.0E-8	206	258	No hit	No description
SMART	SM00338	8.3E-6	210	273	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.163	212	256	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.8E-7	213	253	IPR004827	Basic-leucine zipper domain
CDD	cd14708	2.51E-21	214	266	No hit	No description
SuperFamily	SSF57959	2.25E-6	214	256	No hit	No description
PROSITE pattern	PS00036	0	217	232	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	8.5E-32	295	370	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence Send to blast
MESQRIGDTA SLSADHSGPS HHHHHNMSYA LLRGLNPTNT TSFMYHSTPN NQEPPAFDFG 60 ELEEAIVLQG VKMSNDETKA SLYAATNRPA ATLEMFPSWP TRFHHTPRGS SKSGEESTDS 120 GSALNTFSSR GEHHLEPESP ISRKQSSDHH QTIEQNQQLQ IPQLQLPQQH QQLQEMASDS 180 PRTVVSNSTE PASKPNYEKR KGAGSTSDRV TDAKTLRRLA QNREAARKSR LRKKAYVQQL 240 ETSRIRLAQL EQELQRARSQ GLFMGGGAAA NSNISSGAAI FDMEYSRWLD DDQRHIAELR 300 TALQAHLGDA DLRVIVDGYI AHYDEIFRLK GVAAKSDVFH LITGIWTTPA ERCFLWMGGF 360 RPSELIKMLI AQLDPLTQQQ VVGIYSLQQS SQQAEEALSQ GLEQLQQSLV ETVASDSVND 420 GMHHMAVALG KLANLEGFVR QADNLRQQTL HQLHRILTVR QAARCFLVTG EYYGRLRALS 480 SLWASRPRET MIVDDNSCQT TTELQMIQAS QHHFSNM

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence Send to blast

MESQRIGDTA SLSADHSGPS HHHHHNMSYA LLRGLNPTNT TSFMYHSTPN NQEPPAFDFG  60
ELEEAIVLQG VKMSNDETKA SLYAATNRPA ATLEMFPSWP TRFHHTPRGS SKSGEESTDS  120
GSALNTFSSR GEHHLEPESP ISRKQSSDHH QTIEQNQQLQ IPQLQLPQQH QQLQEMASDS  180
PRTVVSNSTE PASKPNYEKR KGAGSTSDRV TDAKTLRRLA QNREAARKSR LRKKAYVQQL  240
ETSRIRLAQL EQELQRARSQ GLFMGGGAAA NSNISSGAAI FDMEYSRWLD DDQRHIAELR  300
TALQAHLGDA DLRVIVDGYI AHYDEIFRLK GVAAKSDVFH LITGIWTTPA ERCFLWMGGF  360
RPSELIKMLI AQLDPLTQQQ VVGIYSLQQS SQQAEEALSQ GLEQLQQSLV ETVASDSVND  420
GMHHMAVALG KLANLEGFVR QADNLRQQTL HQLHRILTVR QAARCFLVTG EYYGRLRALS  480
SLWASRPRET MIVDDNSCQT TTELQMIQAS QHHFSNM

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019267195.1	0.0	PREDICTED: transcription factor TGA2.2-like
Refseq	XP_019267203.1	0.0	PREDICTED: transcription factor TGA2.2-like
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A1J6IMX9	0.0	A0A1J6IMX9_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRING	XP_009613713.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3683	23	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-177	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]