PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00000g51014.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ARR-B
Protein Properties Length: 625aa    MW: 70861.7 Da    PI: 4.6393
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00000g51014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like63.44.2e-20235284555
                   G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               +WtpeLH++F+++v+qL G+    Pk+ilelm+v+gLt+ +v+SHLQk R 
  Peaxi162Scf00000g51014.1 235 EWTPELHAKFMKVVRQL-GEGGCYPKEILELMNVPGLTRMQVASHLQKCRN 284
                               7****************.9999**************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23007.9E-1214143No hitNo description
SuperFamilySSF521723.98E-1114145IPR011006CheY-like superfamily
PROSITE profilePS5011019.20316130IPR001789Signal transduction response regulator, receiver domain
CDDcd001569.78E-718113No hitNo description
PROSITE profilePS5129410.026227287IPR017930Myb domain
SuperFamilySSF466891.67E-14231284IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.9E-20233284IPR009057Homeodomain-like
TIGRFAMsTIGR015573.1E-17234285IPR006447Myb domain, plants
PfamPF002495.0E-7235282IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    Send to blast
MEYLMSPYYG MIDEVRVLLV DHDKEFVFKI VDLLESYKYK VTIVDLASTA MSMLSKDKER  60
FDIMIINVHS PDLLSFQLLA QAVALDIVSI FVCDEHHTVL AKRALDIGAY LYLKIPLYEE  120
FVKYMWQFVL RERLKKEKER EERTGEMNIV DDSAIIHNSI VGNEQVGVKI IPNNNEDDHD  180
ENDNRTEVEN NNINVVSKGK YKVRRSKRGR KRTTTTEVEP DSQDTGSPRR KVCTEWTPEL  240
HAKFMKVVRQ LGEGGCYPKE ILELMNVPGL TRMQVASHLQ KCRNNNWRVP EVRTARHSNG  300
QGSSGGSQQR VFQRKFGSVP RLQTNFVQQQ HQQLNQDQSP RIPLPSEFVF PPLNNTFTRG  360
EISTEQHVYR LQLVHVEPYY VNIGNPVNNP LLSQINVGGL HQHTGRPYGM VGLGQGGPVI  420
DKSAVYAPGL GDHVQDDYNM NVNMGIGTYS DSAMISNTNE NMKMDGFVAA AANANFQQFY  480
GEHNLSDPSM NFVASHASDS ESESDERTNG DEYFDFNDVD YLFQNLGPPD NDLPNEQSDS  540
EFDQVYSDDQ VEPTPSIHFS GTTSSPDEEG GSEFDQVYSD YQVVPTPSIQ FSGTTSFPDE  600
QGGNEFDQVY SDDQVSTICI YLHNF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016461121.11e-179PREDICTED: two-component response regulator ORR21-like
TrEMBLA0A1J6J4W61e-179A0A1J6J4W6_NICAT; Two-component response regulator arr1
STRINGXP_009798262.11e-130(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-25response regulator 2