PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_9786598g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 196aa MW: 21680.9 Da PI: 7.4407 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.8e-18 | 106 | 157 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr+++ +g+++AeIrdp++ g r++lg+f aeeAa a+++a+ +l+g+ MA_9786598g0010 106 HYIGVRQRP-WGKFAAEIRDPVKKG--SRIWLGTFNIAEEAALAYDRAAYRLRGA 157 699******.**********76643..**************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.6E-30 | 105 | 164 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.603 | 106 | 164 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.18E-22 | 106 | 165 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 3.55E-28 | 106 | 164 | No hit | No description |
SMART | SM00380 | 4.0E-33 | 106 | 170 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.0E-12 | 106 | 156 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.2E-12 | 107 | 118 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.2E-12 | 146 | 166 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MLDLIRHHLL EVEDEDDIDN EGSSSSNGGS VYFNIDDDDN IQANATATRG SCQNSSSRIT 60 CKENEFTLDN NSSSLCSVTR RTEVFKVKPQ PWEQENGKTE QISARHYIGV RQRPWGKFAA 120 EIRDPVKKGS RIWLGTFNIA EEAALAYDRA AYRLRGARAL LNFPLALASN SEKGSGVGRK 180 RKRGNSVSGA AGWSLD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-31 | 105 | 169 | 4 | 68 | ATERF1 |
3gcc_A | 2e-31 | 105 | 169 | 4 | 68 | ATERF1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 177 | 183 | GRKRKRG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A023ZYJ7 | 3e-62 | A0A023ZYJ7_9SPER; Ethylene responsive factor 1-like protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 3e-18 | ERF family protein |