PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_9786598g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 196aa    MW: 21680.9 Da    PI: 7.4407
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_9786598g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-18106157256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      +y GVr+++ +g+++AeIrdp++ g   r++lg+f  aeeAa a+++a+ +l+g+
  MA_9786598g0010 106 HYIGVRQRP-WGKFAAEIRDPVKKG--SRIWLGTFNIAEEAALAYDRAAYRLRGA 157
                      699******.**********76643..**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.6E-30105164IPR001471AP2/ERF domain
PROSITE profilePS5103222.603106164IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-22106165IPR016177DNA-binding domain
CDDcd000183.55E-28106164No hitNo description
SMARTSM003804.0E-33106170IPR001471AP2/ERF domain
PfamPF008472.0E-12106156IPR001471AP2/ERF domain
PRINTSPR003678.2E-12107118IPR001471AP2/ERF domain
PRINTSPR003678.2E-12146166IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MLDLIRHHLL EVEDEDDIDN EGSSSSNGGS VYFNIDDDDN IQANATATRG SCQNSSSRIT  60
CKENEFTLDN NSSSLCSVTR RTEVFKVKPQ PWEQENGKTE QISARHYIGV RQRPWGKFAA  120
EIRDPVKKGS RIWLGTFNIA EEAALAYDRA AYRLRGARAL LNFPLALASN SEKGSGVGRK  180
RKRGNSVSGA AGWSLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-31105169468ATERF1
3gcc_A2e-31105169468ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177183GRKRKRG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A023ZYJ73e-62A0A023ZYJ7_9SPER; Ethylene responsive factor 1-like protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.13e-18ERF family protein