PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_97319g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 26297.7 Da PI: 8.9197 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63 | 6.5e-20 | 73 | 121 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+Wv+eIr+p++ ++r++lg+f+t+e+Aa+a++ a+ +l+g MA_97319g0010 73 YRGVRRRS-WGKWVSEIREPKK---KTRIWLGSFDTPEMAARAYDVAAFYLKG 121 9****887.**********854...6************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.6E-13 | 71 | 121 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.18E-20 | 72 | 131 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-30 | 72 | 131 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.868 | 72 | 130 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.1E-37 | 72 | 136 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.31E-32 | 73 | 132 | No hit | No description |
PRINTS | PR00367 | 1.5E-10 | 73 | 84 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.5E-10 | 95 | 111 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MTLCCSILPA SLSVQKSLGK KACFLLTSSA DTEASSKSAS TGKGGMKRIR TQDEATPSPP 60 HEESSLKLQN PAYRGVRRRS WGKWVSEIRE PKKKTRIWLG SFDTPEMAAR AYDVAAFYLK 120 GKRHALLNFP ELIDHLPRPI SSSPCHIQAA AAEAAVTFHS ESAGNSGRSC DAKKPARKRP 180 KKPPVRYNER AASSSDSEIA SVELSGQGDT SNSSSVCTPT ECVGECVVVE EDLFESLNLF 240 TY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 8e-17 | 73 | 130 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 1e-16 | 69 | 130 | 11 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | D5ABJ6 | 8e-75 | D5ABJ6_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-37 | ERF family protein |