PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_96063g0020
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 268aa    MW: 29833.4 Da    PI: 7.147
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_96063g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-1762112255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr ++ +g+++AeIrd +    +  r++lg+f t eeAa a+++a+ +++g
  MA_96063g0020  62 HYRGVRKRP-WGKYAAEIRDSTR---HgVRVWLGTFETGEEAAMAYDQAAFAIRG 112
                    8********.**********422...25************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.19E-2961121No hitNo description
Gene3DG3DSA:3.30.730.101.9E-3061121IPR001471AP2/ERF domain
PROSITE profilePS5103223.0962120IPR001471AP2/ERF domain
SMARTSM003808.8E-3762126IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-2262122IPR016177DNA-binding domain
PfamPF008472.3E-1362112IPR001471AP2/ERF domain
PRINTSPR003671.3E-106374IPR001471AP2/ERF domain
PRINTSPR003671.3E-1086102IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MVLYGVLKDD FSHGRHLTPS SDSQMMTSTQ EIKGQSGTAE RKPVQRSKPT KKLKAKVSGE  60
KHYRGVRKRP WGKYAAEIRD STRHGVRVWL GTFETGEEAA MAYDQAAFAI RGSNAILNFP  120
VEVVRNSFKT GPVFPASSVN FSGGSFEISS GVTTFSTQLS DYNSRIQQLD EYHSRTPTSA  180
PETHVVVRLD SCTKRRRPAP FPAEELRANI FEDSQNADKS GEVLLIAEPK CYETQSVLEL  240
ETLSVDYLEK LLLSTQEEEA AAAPTFEF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2861123163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ0711883e-95FJ071188.1 Pinus taeda isolate 1667 anonymous locus 0_3648_01 genomic sequence.
GenBankFJ0711923e-95FJ071192.2 Pinus taeda isolate 1655 anonymous locus 0_3648_01 genomic sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.11e-35ethylene-responsive element binding factor 15