PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_959784g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 22778.1 Da PI: 4.7032 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++kG+r +k +g+Wv+eIr p++ rk+++lg++ t+e+Aa+a++aa +l+g MA_959784g0010 24 QFKGIRLRK-WGKWVSEIRKPKT---RKKIWLGSYPTPEQAARAYDAAVYCLRG 73 69*****99.**********965...4*************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 9.7E-28 | 23 | 83 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.14E-27 | 24 | 83 | No hit | No description |
SuperFamily | SSF54171 | 7.19E-20 | 24 | 83 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.641 | 24 | 81 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.3E-31 | 24 | 87 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.4E-8 | 25 | 36 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 6.5E-12 | 25 | 73 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.4E-8 | 47 | 63 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MENSPEQEHD HENALPHEDC GSRQFKGIRL RKWGKWVSEI RKPKTRKKIW LGSYPTPEQA 60 ARAYDAAVYC LRGPDEKFNF PDSLPDIPSA SSLSHLQIQY AARKHASGQS TSSLPSLTGH 120 ASPSASVSEM ELSGDKQKIS EERLDLAPLW SLFEESDSAG IANSEKFPSI DEVSTLELNP 180 TSQEQEEVEE GYISTDLWNF RDV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 2e-12 | 24 | 81 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | B8LMR5 | 5e-86 | B8LMR5_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 5e-35 | ERF family protein |