PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_95747g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | MYB_related | ||||||||
Protein Properties | Length: 326aa MW: 36614.7 Da PI: 5.2024 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.5 | 3.7e-14 | 25 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++ +++++ lG++ W+tIa+ ++ g t++++k++w ++l MA_95747g0010 25 RGSFTQQEEQTIIQLHGILGNR-WSTIASQLP-GITANEIKNFWTTHL 70 89********************.*********.***********9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 4.333 | 1 | 19 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 3.5E-11 | 6 | 31 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 7.27E-19 | 6 | 78 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 22.252 | 20 | 74 | IPR017930 | Myb domain |
SMART | SM00717 | 5.8E-12 | 24 | 72 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 1.7E-12 | 25 | 70 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.66E-8 | 27 | 70 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.2E-18 | 32 | 74 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MQGLLRCGKS CRLRWTNYLR PDIKRGSFTQ QEEQTIIQLH GILGNRWSTI ASQLPGITAN 60 EIKNFWTTHL KKRLLKMGLD LSTHAPIGEA NPTAPEGFEA LALTRHTAQW ENARLEAEAR 120 LSRESLLISS NSAAGYDTNR TVEIITMPSD NPPPDFFLKI WNSEAGKVFR KGSHHPKGGG 180 DDSVLSFTQN SCDQSLSPND KDNGSPLCNS ASFEWIGDCN VKTPQVLSCL ADMTMGHTED 240 KAHEDLLDFP ELLLDFPDND DNNNNTNSIQ SESSQRQPSS PWPELHDEDY WSNLSFTAHP 300 SAHSRDFAPD FRHPYVCLLL YFELSI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1a5j_A | 2e-17 | 6 | 74 | 40 | 108 | B-MYB |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A222UAM7 | 3e-74 | A0A222UAM7_GINBI; R2R3MYB15 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 4e-62 | myb domain protein 17 |