PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_938274g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 198aa MW: 21876.3 Da PI: 7.0784 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 9.4e-19 | 103 | 154 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdp + k +r++lg+f taeeAa a+++a+ +++g+ MA_938274g0010 103 HYRGVRQRP-WGKFAAEIRDPAK--KGARVWLGTFSTAEEAALAYDRAAFRIRGA 154 7********.**********954..34*************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 7.8E-32 | 102 | 161 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.8E-13 | 103 | 153 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.7E-38 | 103 | 167 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-23 | 103 | 162 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 24.276 | 103 | 161 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.78E-30 | 103 | 161 | No hit | No description |
PRINTS | PR00367 | 3.2E-11 | 104 | 115 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-11 | 127 | 143 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence Send to blast |
MDVAEASLNI NMLEFIRHHL LEGEDDVDII DIGGNSSSIS SSLSSSSSSS ISISENDESE 60 FTQQNYSSPS SACSVIRRAE TFKVKPRAHE EENREMKKSW ARHYRGVRQR PWGKFAAEIR 120 DPAKKGARVW LGTFSTAEEA ALAYDRAAFR IRGARALVNF PLAFASNSEN GSAVGHKVQK 180 RKRGNDEGEV AEGLVLFP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-34 | 102 | 162 | 4 | 64 | ATERF1 |
3gcc_A | 1e-34 | 102 | 162 | 4 | 64 | ATERF1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Involved in disease resistance pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630, ECO:0000269|PubMed:9756931}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by jasmonate (JA) and Alternaria brassicicola (locally and systemically). Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2) while wounding induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010494952.1 | 1e-40 | PREDICTED: ethylene-responsive transcription factor 2-like | ||||
Swissprot | O80338 | 2e-35 | EF101_ARATH; Ethylene-responsive transcription factor 2 | ||||
TrEMBL | A9NMA3 | 4e-73 | A9NMA3_PICSI; Uncharacterized protein | ||||
STRING | XP_010494952.1 | 5e-40 | (Camelina sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 8e-27 | ethylene responsive element binding factor 2 |
Publications ? help Back to Top | |||
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