PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_93736g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 272aa MW: 29869.8 Da PI: 8.857 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.6 | 2.2e-13 | 84 | 128 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er RR+++N +++L++llPk + K++K i+ +A++YIk Lq MA_93736g0010 84 TERARRSKMNCMLNTLKSLLPKG---FHSKVDKGRIVDEAIDYIKTLQ 128 6*********************9...8********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.306 | 76 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.45E-15 | 80 | 146 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.0E-15 | 81 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.63E-12 | 81 | 132 | No hit | No description |
SMART | SM00353 | 2.6E-10 | 82 | 133 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.2E-11 | 84 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence Send to blast |
MLSGTPFPIM SEYRDSEDLY TIVSAYSTST SSRPVEKQES VVQSKTSGGK RSWAGAISPS 60 LQEDDQGPAS TKKTCPDNKI HVWTERARRS KMNCMLNTLK SLLPKGFHSK VDKGRIVDEA 120 IDYIKTLQAT LKDFQAQKSE MEAHHSRRPL SFTKSEDSHG LHIPPSVPVA SSYPGLKILG 180 SNVMGSHAFI TIWGPHKTGF LPKLFSVLDA NQLEIVNCTI NAVGSNIVYA LHAMSKNNNQ 240 QVTTKALSCT IDELNTTIAG PQEYALQKSS NE |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1226 | 15 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 3e-14 | bHLH family protein |