PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_93552g0020 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | SAP | ||||||||
Protein Properties | Length: 236aa MW: 25356.5 Da PI: 5.5581 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 110.8 | 1.4e-34 | 46 | 235 | 277 | 453 |
SAP 277 eelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgv.vlreeeerrGlivssldasneayvvvdsrGvatvrrv 371 elvf GG +tdP+a++GW +lte +e + rvr+ + + t++++ +fdl +g+ v eee+ +G+iv s+da+ ++++ ++G+a++ ++ MA_93552g0020 46 RELVFNGGDITDPDALRGWRLLTEQAERIARVRIGGDSLLLLATRSKVAAFDLETHGNrVSIEEETDEGIIVESVDANRGRFLAASNNGNARICQI 141 689***************************************************9965267778888**************************998 PP SAP 372 e.nleevcrfrv..........rg...aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfg 453 +l++vc f + +g +r+++g +n+ a + + gv+ +W+ + + ly l e++g+v lvad+ hva ++ d+ ihl+ f MA_93552g0020 142 GtTLKNVCTFPLddlggadnnsSGsnnNHRKIVGTLNTWLAFISIDGVVHAWDAYSGA-GLYRLVEQIGDVFDLVADNEHVAGCA-DNGIHLWSFR 235 6267******87333333332212445689************************9977.79*********************997.5669****96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF50978 | 5.04E-8 | 77 | 233 | IPR017986 | WD40-repeat-containing domain |
Gene3D | G3DSA:2.130.10.10 | 2.1E-6 | 90 | 234 | IPR015943 | WD40/YVTN repeat-like-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MCGVHTRAKL GTTAHWSTSP VAIGIGWACM PGSPVTPVIY GMPARRELVF NGGDITDPDA 60 LRGWRLLTEQ AERIARVRIG GDSLLLLATR SKVAAFDLET HGNRVSIEEE TDEGIIVESV 120 DANRGRFLAA SNNGNARICQ IGTTLKNVCT FPLDDLGGAD NNSSGSNNNH RKIVGTLNTW 180 LAFISIDGVV HAWDAYSGAG LYRLVEQIGD VFDLVADNEH VAGCADNGIH LWSFRA |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP9756 | 9 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 2e-26 | SAP family protein |