PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_91468g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 594aa    MW: 66657.3 Da    PI: 9.7337
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_91468g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.65.2e-28381439259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dg++WrKYGqK+ ++++ prsYYrC +a gCpvkk+v+r a+dp++v++tY+geH+h+
  MA_91468g0010 381 NDGCEWRKYGQKMTRNNQRPRSYYRCVMApGCPVKKQVQRYAQDPTTVVTTYKGEHTHS 439
                    8**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.5E-30367439IPR003657WRKY domain
SuperFamilySSF1182901.7E-25372440IPR003657WRKY domain
PROSITE profilePS5081125.752375441IPR003657WRKY domain
SMARTSM007745.9E-31380440IPR003657WRKY domain
PfamPF031068.0E-24381438IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    Send to blast
MEGHKNKITV LVAKINRINE ENQKLKSMLN GVYCRYNHLQ KHIRPMLQHW NDVDGSQIFN  60
RDHGSEDILW RSSIDVDSSS AISHQSAQYW GSHDQGGEKE KKNVKFMDDQ QLPSKKRKNG  120
MFNSSIEQME DLPNKKLHVT TKGSDQQTAA AAKRTVSVQR ISEASVILKT LMGKVLVERN  180
EAHQEIFLRP NEMQRQLQDM DLKLDKLASK NVAQAREDQI TVLVAKINRI NEENQKLKSM  240
LDCAYCRYNH LQKHIRPMLQ QCNGVDGSQI FNQEHRSKDI LCGRSINSDS SSVISHQSAE  300
YWDGREQGGG GREKKNVKFM DDQQLPSKKR NNGMINSSIE QMDDLPKKKL RVMTKGFGQH  360
TAAAAKRTLS VQTRSEASAI NDGCEWRKYG QKMTRNNQRP RSYYRCVMAP GCPVKKQVQR  420
YAQDPTTVVT TYKGEHTHSL SPLATAVMHA SSNQLISEGL NIANFVADNQ FTPFSTAIAR  480
ISTSSSLITL DLTDNRPDQP GLQLLPAHLA AGSLHLPSLS NDIGQALDYH NRLDNYSSIM  540
QDSVASIIAN PNFSTSLAVA IAGSLVNLGT PVQVMSKTPH AKHFTHGSTE KEFV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-21371440876Probable WRKY transcription factor 4
2lex_A6e-21371440876Probable WRKY transcription factor 4
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A482CVK91e-121A0A482CVK9_9SPER; WRKY164
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.13e-28WRKY family protein