PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_900190g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 263aa    MW: 29078.5 Da    PI: 5.7282
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_900190g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-1865114255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ykGVr+++ +g+Wv+eI++p++   + +++lg+f+t+e+Aa+a++ a  +l+g
  MA_900190g0010  65 TYKGVRRRS-WGKWVSEIKEPKK---KSKVWLGSFDTPEMAARAYDVAEFYLKG 114
                     69****887.**********854...6*********************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.1E-2865124IPR001471AP2/ERF domain
PROSITE profilePS5103222.47165123IPR001471AP2/ERF domain
SMARTSM003803.4E-3165129IPR001471AP2/ERF domain
PfamPF008472.1E-1265114IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1965123IPR016177DNA-binding domain
CDDcd000188.61E-2866124No hitNo description
PRINTSPR003671.9E-96677IPR001471AP2/ERF domain
PRINTSPR003671.9E-988104IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MDKESSSMDK EDSFTPETMV TSSTASGASS KSASTVKGGV KRIRTQNKAA SSSPQERTLK  60
LPYPTYKGVR RRSWGKWVSE IKEPKKKSKV WLGSFDTPEM AARAYDVAEF YLKGKKHALL  120
NFPEMIDHLS QPISLSPRDI QVAAEEAALA FYINKQERKS PRNPPVSNKP PSSSHQLFTV  180
ISSDFQTTNV ELSGQTNTSN SSSICTPTEG VGESECIVVE EDLFESFNLS ANLAEAPLLS  240
PPLLFSIHEE EHNLEEGSLW PDF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1557123672Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1236030.0BT123603.1 Picea sitchensis clone WS04715_D08 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ABJ60.0D5ABJ6_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.17e-36ERF family protein