PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_8980g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 387aa    MW: 43714.9 Da    PI: 6.5274
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_8980g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.93.4e-52121391128
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 
                   lppGfrF Ptd+elvv+yL++k++++ + +  +i+evd+yk++Pw+Lp+k+  +ekewyfF++rd+ky++g+r+nra+ sgyWkatg dk++++k +
  MA_8980g0010  12 LPPGFRFFPTDDELVVHYLCRKAASQAIAV-PIIAEVDLYKFDPWQLPEKALFGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPITAKgS 107
                   79*************************999.88***************8888899***************************************966 PP

           NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                   ++ vg+kk Lvfy g+apkg+kt+W+mheyrl
  MA_8980g0010 108 NKRVGIKKALVFYVGKAPKGNKTNWIMHEYRL 139
                   677***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-638165IPR003441NAC domain
PROSITE profilePS5100560.79112165IPR003441NAC domain
PfamPF023651.3E-2613139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009611Biological Processresponse to wounding
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MGRPNAEAQL NLPPGFRFFP TDDELVVHYL CRKAASQAIA VPIIAEVDLY KFDPWQLPEK  60
ALFGEKEWYF FTPRDRKYPN GSRPNRAAGS GYWKATGADK PITAKGSNKR VGIKKALVFY  120
VGKAPKGNKT NWIMHEYRLA DVNRSAKKKG SLRLDDWVLC RIYNKKSSAE KLAKEQKEWS  180
SEEAMEQFHE EIDEKVPGIL PTGNTIMNSS IEHSERTSQD STISAPSPNC RTASNHDSRA  240
SAITSLSYNS NPIFEQNLNL SNASSAPMEI PELVPFFSSM NNRRTNYDSA DLIPPILLTD  300
SSCSMQSSHD LKSEKEEVQS SFRLEELMQQ QQQENAGLNQ QMFSFGFESL QNPFPSLDQI  360
QPPTNNDPFQ DYLASLTVPS YLQRSSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-8851718174Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00121DAPTransfer from AT1G01720Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0867730.0EF086773.1 Picea sitchensis clone WS02922_C21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020254522.11e-101LOW QUALITY PROTEIN: NAC domain-containing protein 68-like
TrEMBLA9NZG80.0A9NZG8_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.14e-96NAC family protein