PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_896002g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 324aa MW: 34381.1 Da PI: 4.5739 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 117 | 167 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g MA_896002g0010 117 PVYRGVRMRT-WGKWVSEIREPKK---KSRIWLGTFPTPEMAARAHDVAALSIKG 167 68*****998.**********854...6***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.2E-12 | 117 | 167 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.33E-21 | 118 | 176 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.6E-36 | 118 | 181 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.275 | 118 | 175 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.5E-31 | 118 | 176 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.01E-31 | 119 | 177 | No hit | No description |
PRINTS | PR00367 | 4.5E-10 | 119 | 130 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.5E-10 | 141 | 157 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MVRSFESEAS PSSACCGLNE QQGRSCADSG PRGAINSCIC PDLSGGNCIY RSSALVNAAA 60 STSTGSSGSD SALVLMQNRS RKRRAEEINN ADDSGEEESA VCNVDKQGGR GKGNRHPVYR 120 GVRMRTWGKW VSEIREPKKK SRIWLGTFPT PEMAARAHDV AALSIKGKSA FLNFPNLVAS 180 LPRPATLSGK DIQAAAAAAA AEFQMPSEKD RGEDGSLDLA GMNTVISIDA DTEISAESRN 240 NEQAAAAAAC AASNSAWVSN FLSGNESTII DDDILFDLPN FLGNMAEALL VAPPWLLEQE 300 ELYGNTYSAA DNVYEGNGVM SLWN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-21 | 107 | 176 | 3 | 73 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | B8LM17 | 1e-115 | B8LM17_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-45 | ERF family protein |