PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_8893g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 294aa    MW: 33663.2 Da    PI: 7.4031
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_8893g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM138.44.5e-4341303128
           NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                   pGfrF Pt+eelv +yLkk+ve+++ l++++vi+++d+y+++Pw+Lp  + + +e++w+fF++rd+k++   r+nr t sg+Wkatg+d++v +k  
  MA_8893g0010   4 PGFRFYPTEEELVGFYLKKRVEDSHqLKVDRVIPTLDLYRYDPWELPgLANDVGERQWFFFVPRDHKKS-RPRPNRLTVSGFWKATGSDRAVRNKLL 99 
                   9********************99887899999***************555566999**********986.68**********************999 PP

           NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                   + +glkk+Lvfykg+a  g++tdW+m+eyrl
  MA_8893g0010 100 QCIGLKKILVFYKGKALGGQRTDWIMNEYRL 130
                   99***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100549.972152IPR003441NAC domain
SuperFamilySSF1019413.14E-454152IPR003441NAC domain
PfamPF023659.6E-244130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MDNPGFRFYP TEEELVGFYL KKRVEDSHQL KVDRVIPTLD LYRYDPWELP GLANDVGERQ  60
WFFFVPRDHK KSRPRPNRLT VSGFWKATGS DRAVRNKLLQ CIGLKKILVF YKGKALGGQR  120
TDWIMNEYRL PDFSSSGTKN KMDIVLCRIY RKAASRKCIE ERANPYHFEK EEPVFSAGDV  180
YEENLSSLFT LNGSCRLPNP TGKTELSSLH YQNQGGVSSS DLCKTNGEDS LLECLEPIMF  240
CEETTVSKTP KACTPPHLEL ATFSTDFLFS HEQIPSPWAD NPNAWTPYAL LSTP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-38415519168NO APICAL MERISTEM PROTEIN
1ut4_B2e-38415519168NO APICAL MERISTEM PROTEIN
1ut7_A2e-38415519168NO APICAL MERISTEM PROTEIN
1ut7_B2e-38415519168NO APICAL MERISTEM PROTEIN
4dul_A2e-38415519168NAC domain-containing protein 19
4dul_B2e-38415519168NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A075M5N51e-116A0A075M5N5_9SPER; NAC domain protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.14e-54NAC domain containing protein 35