PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_86256g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 374aa    MW: 42285.4 Da    PI: 7.1498
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_86256g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.32.2e-51121391128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                    lppGfrF Pt+eelvv+yL+kk+++ +l++  +i++vd+yk++Pw+Lp+k+  +ekewyfF++rd+ky++g+r+nra+ sgyWkatg dk++ +k 
  MA_86256g0010  12 LPPGFRFFPTEEELVVHYLCKKAASLPLPV-PIIADVDLYKYDPWQLPEKALFGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIAAKg 106
                    79****************************.88***************8888899***************************************96 PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +++ vg+kk Lvfy g+apkg+kt+W+mheyrl
  MA_86256g0010 107 GKKRVGVKKALVFYVGKAPKGTKTNWLMHEYRL 139
                    6777***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-639165IPR003441NAC domain
PROSITE profilePS5100560.41312165IPR003441NAC domain
PfamPF023659.0E-2613139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MGRRNAEAEL QLPPGFRFFP TEEELVVHYL CKKAASLPLP VPIIADVDLY KYDPWQLPEK  60
ALFGEKEWYF FTPRDRKYPN GSRPNRAAGS GYWKATGADK PIAAKGGKKR VGVKKALVFY  120
VGKAPKGTKT NWLMHEYRLA DINRPVRKKG SLRLDDWVLC RIYSKKVSAE KLAQEQKESS  180
NDVAMETIDE KDMEILPTST SIGHSGIEDS KPSSDQLNKF GPSTTSYSTV PTNSNICFQN  240
LDFFQNSTTP FSGSTLKTPV QNTAFNPISS SINHHWTNYN STDLIPGLHT DSSCSKPSSF  300
SEPISEKEEI QSSFRLENFS QEQQQSLSNF SPEVLQNPFP YLDQTSFPDA YQDCFTSLNC  360
SDYLTRLYSN ELFH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-8441717174Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU2883301e-141KU288330.1 Picea breweriana isolate A/1433 NAM protein (sb29) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008792531.11e-99NAC domain-containing protein 68-like isoform X2
RefseqXP_010922868.25e-99NAC domain-containing protein 68
TrEMBLA0A0D6R3P91e-162A0A0D6R3P9_ARACU; Uncharacterized protein
STRINGGSMUA_Achr6P32330_0014e-98(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-82NAC family protein