PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_85675g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family C2H2
Protein Properties Length: 519aa    MW: 57731.1 Da    PI: 6.4727
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_85675g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.00112749123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y C++C+k+F +   L  H+r H
  MA_85675g0010 27 YLCKICSKRFVSGRALGGHMRAH 49
                   56*******************98 PP

2zf-C2H214.69.5e-05132149320
                    ETTTTEEESSHHHHHHHH CS
        zf-C2H2   3 CpdCgksFsrksnLkrHi 20 
                    C  Cgk Fs++ +L  H+
  MA_85675g0010 132 CDLCGKEFSSWKDLFGHM 149
                    *****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139122.3E-82749IPR007087Zinc finger, C2H2
SMARTSM003550.0742749IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.0762749IPR007087Zinc finger, C2H2
SuperFamilySSF576671.78E-52749No hitNo description
PROSITE patternPS0002802949IPR007087Zinc finger, C2H2
SuperFamilySSF576671.78E-5125152No hitNo description
SMARTSM003550.01130152IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.058130157IPR007087Zinc finger, C2H2
PfamPF139125.9E-7131154IPR007087Zinc finger, C2H2
PROSITE patternPS000280132152IPR007087Zinc finger, C2H2
SuperFamilySSF576673.66E-7321344No hitNo description
PfamPF139122.6E-8321346IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.118322349IPR007087Zinc finger, C2H2
SMARTSM003550.083322344IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280324344IPR007087Zinc finger, C2H2
SuperFamilySSF576673.66E-7409436No hitNo description
PfamPF139121.2E-12414437IPR007087Zinc finger, C2H2
SMARTSM003550.48414436IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.203414436IPR007087Zinc finger, C2H2
PROSITE patternPS000280416436IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MTIMDILYPK SQAMEVFKKQ REHPLSYLCK ICSKRFVSGR ALGGHMRAHV PASMAADTVA  60
QTEFRKTKRP RTSDDKSMEE KEDEEGLDGN GTNLMFALGR NSKRSWRFAD RDSSLLLGYG  120
FDSKPIDSSI NCDLCGKEFS SWKDLFGHMI CHYETHQDSG DAHLEESQKH ETQETQDQDS  180
CDTHFEESQK HETHDQEEHR SDSDDEIEID HPSGNSSKFD KGKRSKRPGY TIKLINPHEQ  240
FGLETNNEEE DMAMCLVMLA SGANTAQNPQ SQVGAEKPGS GDLKLSSTGC QLPKCIRKKL  300
KSNKIDGDAV LYDGDEVKKA RYKCITCNKV FHSHQALGGH RASHNKVKGS VSQIEKENES  360
LEEDITDEEL IPGSDSQLPR NFCKPHPKEK TKDSCVKART IETAAFSGKK SRIHECSICH  420
RVFASGQALG GHKRCHWVSA GASDSITTSS SNKETPVQQQ QMPARVELLD LNLPAPVDDD  480
CDAGNLNNLG GNAVDSHGSS FAQTHNPPYL QSWLKGSYP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0C9RQJ11e-141A0A0C9RQJ1_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_25048_2114 transcribed RNA sequence
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP2521820
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.18e-23C2H2-like zinc finger protein