PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_8384767g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 266aa    MW: 29216 Da    PI: 6.8006
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_8384767g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1854102355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ykGVr+++ +g+Wv+eIr+p+    r +r++lg+f tae+Aa+a++ a+  l+g
  MA_8384767g0010  54 YKGVRRRS-WGKWVSEIREPK----RkTRIWLGSFHTAEMAARAYDVAAFHLKG 102
                      9****887.**********83....45**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-1152102IPR001471AP2/ERF domain
PROSITE profilePS5103223.48553111IPR001471AP2/ERF domain
SMARTSM003803.9E-3453117IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-3053112IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-1953112IPR016177DNA-binding domain
CDDcd000184.36E-3054113No hitNo description
PRINTSPR003676.5E-105465IPR001471AP2/ERF domain
PRINTSPR003676.5E-107692IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MVLVTSSPAT AKATEASSKS TSTGKSGMER IRTQDDIAPS LPEASMLKLH YPAYKGVRRR  60
SWGKWVSEIR EPKRKTRIWL GSFHTAEMAA RAYDVAAFHL KGKKHALLNF PELIDRLPQP  120
MSSSLHHIQA AATKAAVSFS CGSAGNSGKL NNNNKRTKGS PRNLPVSYEH VSTSSHELST  180
IISPDLEKAS TELSGKTEYY TISSSVCTPT EDVGESVIME ENLFDSFNLF TDLAEALLLP  240
PPPLFSIDEV EVEEHISEEG FLWSGF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1754111360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ABJ66e-80D5ABJ6_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.11e-34ERF family protein