PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_81979g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 22549.9 Da PI: 4.5308 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.5e-11 | 16 | 58 | 9 | 55 |
AP2 9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +k +g+Wv+e r p++ r + +lg++ +a++Aa+a++aa +l+g MA_81979g0010 16 RK-WGSWVSETRMPRS---REKLWLGSYPSAQQAARAYDAAVYCLRG 58 55.*******999844...4*************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 17.622 | 5 | 66 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-5 | 10 | 21 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-17 | 13 | 72 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.24E-14 | 14 | 68 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.2E-22 | 15 | 68 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.2E-6 | 16 | 58 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.32E-19 | 16 | 68 | No hit | No description |
PRINTS | PR00367 | 1.1E-5 | 48 | 68 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MGELGIRNSN AQISLRKWGS WVSETRMPRS REKLWLGSYP SAQQAARAYD AAVYCLRGPN 60 AKFNFPDSLP NIPSASSLSR RQIQVAAAKY AFDQLPSSPS FRQDINNKAT EEAASPSRSG 120 SVSETELSSD SHQISNEEEL DLWECLFEVS DSNARCLGLN LERMPSIEEV SALEFFHSTS 180 QEQQEEGHMN ILIDPTELWN F |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT113656 | 2e-55 | BT113656.1 Picea glauca clone GQ03416_G18 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009389872.1 | 5e-34 | PREDICTED: ethylene-responsive transcription factor ERF017-like | ||||
TrEMBL | D5ADJ9 | 4e-68 | D5ADJ9_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 3e-25 | ERF family protein |