PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_8183372g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

G2-like

Protein Properties

Length: 428aa MW: 48188 Da PI: 6.7883

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_8183372g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.8	2.9e-34	38	92	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerFv+av+qLGG++kAtPk+++++m+vkgLtl+h+kSHLQkYRl MA_8183372g0010 38 KPRLKWTPELHERFVDAVSQLGGPDKATPKSVMRVMGVKGLTLYHLKSHLQKYRL 92 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.848	35	95	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	7.9E-33	36	93	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.27E-17	37	94	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.5E-24	38	93	IPR006447	Myb domain, plants
Pfam	PF00249	1.1E-9	40	91	IPR001005	SANT/Myb domain
Pfam	PF14379	6.3E-24	134	180	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence Send to blast
MGLHRAQLPL SQRDHQRGLS TGNIGQNELG VVVSTDPKPR LKWTPELHER FVDAVSQLGG 60 PDKATPKSVM RVMGVKGLTL YHLKSHLQKY RLGKQSCKEN NSDTNKDGGN SDCSKDPNIK 120 SRDNNTRTNQ KEAMHITEAL NAQVEVQKRL HEQLEVQRCL QLRIEAQGKY LQGILEKAQQ 180 ALIYQTSTPA RLGAEPAELV EMVSNVATDC NETASFSRSS ASSSLMDMPT QDEAQYERDR 240 SRVYFCDNGS SIWHNEVSAH DKLQEPGFND SNGCLYKTDS EHELQQTREF NVCSMTNSMW 300 ESNSHNRLLS SDSMKLIEAG QDHPQNENSL RIMDETIMKP TVERLTSRIS LPEERLPMLV 360 QPPNAHLFHA CLSGHEQGLF KNYDPCPPSM LVKRRKAVEG LDLNTRGDQG IPPQQGIQLD 420 LNTYGWGR

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence Send to blast

MGLHRAQLPL SQRDHQRGLS TGNIGQNELG VVVSTDPKPR LKWTPELHER FVDAVSQLGG  60
PDKATPKSVM RVMGVKGLTL YHLKSHLQKY RLGKQSCKEN NSDTNKDGGN SDCSKDPNIK  120
SRDNNTRTNQ KEAMHITEAL NAQVEVQKRL HEQLEVQRCL QLRIEAQGKY LQGILEKAQQ  180
ALIYQTSTPA RLGAEPAELV EMVSNVATDC NETASFSRSS ASSSLMDMPT QDEAQYERDR  240
SRVYFCDNGS SIWHNEVSAH DKLQEPGFND SNGCLYKTDS EHELQQTREF NVCSMTNSMW  300
ESNSHNRLLS SDSMKLIEAG QDHPQNENSL RIMDETIMKP TVERLTSRIS LPEERLPMLV  360
QPPNAHLFHA CLSGHEQGLF KNYDPCPPSM LVKRRKAVEG LDLNTRGDQG IPPQQGIQLD  420
LNTYGWGR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-20	38	94	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-20	38	94	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-20	38	94	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-20	38	94	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-20	38	94	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-20	38	94	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-20	38	94	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-20	38	94	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-20	38	94	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-20	38	94	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-20	38	94	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-20	38	94	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	JQ444608	1e-154	JQ444608.1 Larix decidua isolate AcesapB08 anonymous locus 2_6130_01 genomic sequence.
GenBank	JQ444609	1e-154	JQ444609.1 Larix decidua isolate AcesapB10 anonymous locus 2_6130_01 genomic sequence.

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP78	17	262

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	9e-67	G2-like family protein