PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_7960347g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 271aa    MW: 30293 Da    PI: 8.7003
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_7960347g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.9e-20106157156
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      ++y GVr+++ +g+W+AeIrdps    r  r +lg+++tae Aa a+++a+kkl+g+
  MA_7960347g0010 106 CKYLGVRRRR-WGKWAAEIRDPS----RgVRLWLGTHDTAEAAAMAYDNAAKKLRGP 157
                      79*****777.**********84....36**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.6E-13106156IPR001471AP2/ERF domain
CDDcd000185.29E-21106163No hitNo description
PROSITE profilePS5103221.72107164IPR001471AP2/ERF domain
SMARTSM003806.5E-32107170IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-20107165IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.1E-26107164IPR001471AP2/ERF domain
PRINTSPR003672.1E-8108119IPR001471AP2/ERF domain
PRINTSPR003672.1E-8130146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MPDPKNPNNN TMGAWKKKKN GIVTRKIRLI CNDPDATDLS SDDELKPASH KRLVHEIHIP  60
LSFSAGERIQ SKPKSKSKSR EKSKVPDKKN RDLRNSGFKA RSAKSCKYLG VRRRRWGKWA  120
AEIRDPSRGV RLWLGTHDTA EAAAMAYDNA AKKLRGPLTF TNFGYTQTTT PSSSSSSSES  180
CISDENSLGD YFAVSFSSSV KQMGTLDSLR PLFNHSIFED DSYFMEEFGH TFEMDDCGIS  240
AVTELNMDSL DLPEEENGIL SFCYSGVLTN L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-16103163162ATERF1
3gcc_A1e-16103163162ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027362051.12e-31ethylene-responsive transcription factor CRF1-like
TrEMBLA0A0C9RXU02e-31A0A0C9RXU0_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_5206_2819 transcribed RNA sequence
TrEMBLA9RGF01e-34A9RGF0_PHYPA; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-17ERF family protein