PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_7202656g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 89aa MW: 10107.8 Da PI: 10.7522 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.6 | 8.6e-15 | 23 | 69 | 2 | 52 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 +++G+r +k +g+Wv+eIr p+ + r +lg+++t+e+Aa a++ + MA_7202656g0010 23 QFRGIRMRK-WGKWVSEIRMPK----StGRLWLGSYDTPEKAACAYDFVVCC 69 69*****99.**********85....348*****************965555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 7.5E-22 | 22 | 71 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.1E-17 | 23 | 86 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.187 | 23 | 85 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.29E-19 | 23 | 71 | No hit | No description |
SuperFamily | SSF54171 | 6.34E-15 | 23 | 72 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.3E-7 | 24 | 64 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-8 | 24 | 35 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-8 | 46 | 62 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence Send to blast |
MAKPSQNQNG RSKPKNCSLK SRQFRGIRMR KWGKWVSEIR MPKSTGRLWL GSYDTPEKAA 60 CAYDFVVCCL RAGIKIEVFI ALQEPSSPS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT103899 | 1e-104 | BT103899.1 Picea glauca clone GQ02803_N18 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006851005.1 | 6e-21 | ethylene-responsive transcription factor ERF015 | ||||
Swissprot | Q9S7L5 | 2e-20 | ERF18_ARATH; Ethylene-responsive transcription factor ERF018 | ||||
TrEMBL | B8LPP6 | 3e-33 | B8LPP6_PICSI; Uncharacterized protein | ||||
STRING | ERN12586 | 2e-20 | (Amborella trichopoda) | ||||
STRING | OBART06G06190.1 | 5e-20 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74930.1 | 9e-23 | ERF family protein |
Publications ? help Back to Top | |||
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