PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_7166g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 253aa    MW: 28900.1 Da    PI: 4.6884
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_7166g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-192776255
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  +y+GVr+++ +g+Wv+eIr p++   ++r++lg+++ +e+Aa+a++ a+++l+g
  MA_7166g0010 27 QYRGVRRRR-WGKWVSEIRQPRT---KTRIWLGSYDKPEMAARAYDVAALSLKG 76
                  59****777.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.9722784IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-292785IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-212785IPR016177DNA-binding domain
SMARTSM003806.8E-342790IPR001471AP2/ERF domain
CDDcd000181.86E-292786No hitNo description
PRINTSPR003673.5E-92839IPR001471AP2/ERF domain
PfamPF008471.1E-122876IPR001471AP2/ERF domain
PRINTSPR003673.5E-95066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MDTQSNMVDY NARKRNRSAE ETKNPIQYRG VRRRRWGKWV SEIRQPRTKT RIWLGSYDKP  60
EMAARAYDVA ALSLKGNSAL PNFPHLIHTL PRPASLDPVD IQYAAAEAAL SFTQESPLEC  120
SDHHSASLIN VGGSMEPEAT GDGGHENRQS KQMNNVEEAD PAVDFGYCRH WIDDEWEASS  180
VNLRIRTGRD ECPALFYEEL QQFDSPNLIM NMAEALLLTP PRLYNQLEAE DYHYDVEDCI  240
DQESGFAFLW GIF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1627851473Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11234RKRNRSAEETKNPIQYRGVRRRR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.12e-26ERF family protein