PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_69506g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 126aa MW: 14745 Da PI: 10.1281 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.5 | 1e-07 | 88 | 122 | 5 | 41 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKa 41 n+rE RR +++ +++Lr+llP + p+kKls MA_69506g0010 88 YNAREPHRRIKLKVLYSQLRSLLPDlN---PKKKLSIP 122 69***********************55...*****965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 0.001 | 76 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.22E-6 | 83 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.604 | 83 | 126 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.1E-4 | 88 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.84E-4 | 89 | 120 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MGSLLLHSPW EALHEPAIIT PPRCWQFDHQ QLPTTDNVIL DEYTRSQFGF MHKKYYHHQS 60 PWILPVKSSE LQPNGKEYSG PITKKAFYNA REPHRRIKLK VLYSQLRSLL PDLNPKKKLS 120 IPNTVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 3e-09 | bHLH family protein |