PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_686524g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 615aa    MW: 68375.8 Da    PI: 5.9988
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_686524g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-11395446155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ +  Lr+l+P +     ++ + a+i   A++++k+L+
  MA_686524g0010 395 QRMTHIAVERNRRKQMNEHLTVLRSLMPVS---FTQRGDQASIIGGAIDFVKELE 446
                     79***************************9...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.51E-12393450No hitNo description
PROSITE profilePS5088814.875394445IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-16394465IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-9395446IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-13395463IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-9400451IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.52533612IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    Send to blast
MANLHHFIAG NLAETVERSK NVDIVYESTL LQSGTGQRKA KVNEDITCMA MQCTAIEQNR  60
TDVNREPEIN TSQSTGRRIF TQKESKLLEV GKERDTVALP IRLGKRGERV LLIVKAISGA  120
LEAVSPMEPN DANIIPEGAG KLKWMYSGIH KTSPSYEFET ECAKMGSCRP IEVLGSRAPL  180
NSAPQGKGLS ETLNIFGDRQ SNLALLHMLE GIGMNGDEAR SVPCSFNHGP QLLVPVMEQQ  240
RSWGFQELLS FPICDNDNKR ESLSFDEFLH GGHGSEYDLN LTSCRRPEWP NYDFIQREVQ  300
PFEPESCITH ASESCTSLVK TEAKDQFSSL DAPEEGLSSS SREPNSSNTV NSSDNCNDKR  360
LGNINGYPAN TATCERIRKR KRSKVCKNTE EVESQRMTHI AVERNRRKQM NEHLTVLRSL  420
MPVSFTQRGD QASIIGGAID FVKELEQLLQ SLQAQAQKRR KQCELEGSQS PESAATPFNG  480
FFLSPQYTSY SSQREESKYD MDNSNSDHHN ELTAESKSAI ADVEVTVIET HASLKVLSLK  540
RPGQLLKAIS ALDNLDMTIL HLNITTIDLS VLYSFNVKIE AECQLTSANE IATAVHQIFS  600
IIHSSSTNPV RNCVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1395406RMTHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020532222.11e-101transcription factor bHLH94 isoform X3
RefseqXP_020532224.11e-101transcription factor bHLH94 isoform X5
TrEMBLB8LLL61e-131B8LLL6_PICSI; Uncharacterized protein
STRINGERM966271e-100(Amborella trichopoda)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP25315131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-55bHLH family protein