PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_66442g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 437aa    MW: 48723 Da    PI: 5.9487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_66442g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1862111255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +y GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++g
  MA_66442g0010  62 RYLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAAMAYDRAARSIRG 111
                    588******.**********965...5***********************9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.3E-2862119IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-2062119IPR016177DNA-binding domain
PROSITE profilePS5103221.24662119IPR001471AP2/ERF domain
SMARTSM003802.9E-3362125IPR001471AP2/ERF domain
CDDcd000182.02E-2962118No hitNo description
PRINTSPR003672.0E-86374IPR001471AP2/ERF domain
PfamPF008473.4E-1163111IPR001471AP2/ERF domain
PRINTSPR003672.0E-885101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MASSEHNILV SDNDRFPADS SMMSQSSSSA LAPHVSSATR RSSSSSSSPE RKFKRKQQEP  60
GRYLGVRRRP WGRYAAEIRD PTTKERHWLG TFDTAEEAAM AYDRAARSIR GIKARTNFMY  120
ADMPQGASLT NDMSPEEIER LRNLLLASRM NWTDQQQQAQ PEQVHYNIEE HSRVLHDSSC  180
SIPFNIGSLN PSQFMSMPCN ISEQSKPAMT PNFEAEKALP MQSDTAWTMA NLLDSFPRQV  240
PINNYSNHQL QQSSALALSS IHVPNYSLFS APQDQIPAPI STNIDRNNFH RQIYIPDHLL  300
SPAHNLKSQS LVDAFSTPSS EVCSPDRRIT LPSIEPVSAP ASEVCSPANH VQTNPNSVHS  360
AFPSLYEVSQ GLWVDSNQQP NFADWEGQHC ESPVSCPGIN YDIELNSTML HSPLFGFMPQ  420
VSDSSIHDVF DLGSSQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-20591181171Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00163DAPTransfer from AT1G28160Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.13e-30ERF family protein