PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_65782g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 280aa MW: 31678.4 Da PI: 8.9907 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.4 | 3.4e-29 | 207 | 264 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYG+K vk++++pr+YYrC+s++C+vkk +er+a+d+ +v++tY g+Hnh+ MA_65782g0010 207 EDGYKWRKYGKKLVKNNPNPRNYYRCSSSNCEVKKTMERDAHDKGIVVTTYLGKHNHK 264 8********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-30 | 194 | 266 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.16E-26 | 198 | 266 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.24 | 201 | 266 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-31 | 206 | 265 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.6E-22 | 207 | 264 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence Send to blast |
MRKHRSSSSN KSSLKREADL SKELKVCQTS SQVNRSSLTL QEVPYAGVQL LQISSKDFAS 60 FRETAMANFD PRVGHFQASI KVFSKGQTQL LQEANCSQNP GAEAFEISDF LLLEEEFDNS 120 CKSEDADDQS YNFNTVESGP SFQRECARSS PGNPPCSQGI HLDHNSTVIQ TREPPETLNL 180 KKSSRKSKAE RAMKYAFLTR SETDILEDGY KWRKYGKKLV KNNPNPRNYY RCSSSNCEVK 240 KTMERDAHDK GIVVTTYLGK HNHKSPTLIY NFGRPEIVQA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-23 | 199 | 266 | 10 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 4e-23 | 199 | 266 | 10 | 77 | Probable WRKY transcription factor 4 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 5e-30 | WRKY DNA-binding protein 51 |