PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_65190g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 301aa    MW: 33375.8 Da    PI: 8.0335
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_65190g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-1886135255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  MA_65190g0010  86 RFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 135
                    789******.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.44E-3285142No hitNo description
SuperFamilySSF541715.3E-1986143IPR016177DNA-binding domain
SMARTSM003803.1E-3686149IPR001471AP2/ERF domain
PfamPF008478.2E-1386135IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-2786142IPR001471AP2/ERF domain
PROSITE profilePS5103219.58586143IPR001471AP2/ERF domain
PRINTSPR003671.1E-78798IPR001471AP2/ERF domain
PRINTSPR003671.1E-7109125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MSASDGSSIT HPYSLRSANS SNKPEDCAPP AQLPAMAVQP SANTNHVNSN SNNLHASFNC  60
PINTGFDQSS RAMQAMMRTS NSRRKRFVGV RQRPSGRWVA EIKDTTQKIR MWLGTFETAE  120
EAARAYDEAA CLLRGSNTRT NFVPTVNSCK NSALASRINR LLSLRKDSIA SANSKSIIKE  180
DCKDRHDNNH NASFKSSSNY VSEDTNEDSL PIQQSPSCTF SLCNYVCSSS SHALDGDMDQ  240
PPQRQQDVEK QPRLSHDIHA NHSQISYHIK SSSSVMEEEI VNQPRSVLTP DLSRAEKDHF  300
I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-1582148168ATERF1
3gcc_A2e-1582148168ATERF1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-25related to AP2 11