PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_6447416g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 295aa    MW: 33112.9 Da    PI: 5.3119
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_6447416g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.8e-18192242255
              AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+++AeIrd       +  r++lg+f taeeAa a+++a+ k++g
  MA_6447416g0010 192 HYRGVRQRP-WGKFAAEIRD----SarQGVRVWLGTFTTAEEAALAYDHAAYKMKG 242
                      7********.**********....33334*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.7E-31191251IPR001471AP2/ERF domain
PfamPF008472.2E-12192242IPR001471AP2/ERF domain
SMARTSM003801.7E-37192256IPR001471AP2/ERF domain
PROSITE profilePS5103223.037192250IPR001471AP2/ERF domain
CDDcd000188.34E-29192250No hitNo description
SuperFamilySSF541715.3E-22192251IPR016177DNA-binding domain
PRINTSPR003671.0E-10193204IPR001471AP2/ERF domain
PRINTSPR003671.0E-10216232IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MAFNSTNPED LDGIQIHLFD DFEPSYSLTE NWRPDTTRNC NPEEENFIRT ALTPDVLDEC  60
RRETETETPI PAVKSCRPSL SVSVTRHQSF DWEKIPVDWA LKNSVTPSAS PCLSAAWTKL  120
PLDENDSEDM VLYGILKEAA NKGWMPRTPK EDPVTEIKKE AAFPVKGEAD VRQETGAAPP  180
PPKNVQKSAG RHYRGVRQRP WGKFAAEIRD SARQGVRVWL GTFTTAEEAA LAYDHAAYKM  240
KGSRAVLNFP LQSVGEDSNT CNNTSTLEKV ESNLCRKRER AEVSRGSEVH SDNFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-31190252365ATERF1
3gcc_A8e-31190252365ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017424909.13e-49PREDICTED: ethylene-responsive transcription factor 1A-like
SwissprotQ404797e-46ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLC0PQI31e-151C0PQI3_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-39ethylene responsive element binding factor 1
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]