PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_54341g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 204aa MW: 23234.1 Da PI: 7.2192 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 9.1e-19 | 6 | 53 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 +y+GVr+++ +g+Wv+eIr+p + +r++lg+f t+e+Aa+a+++a+ + MA_54341g0010 6 KYRGVRQRH-WGSWVSEIRHP-----HlkTRVWLGTFETEEDAARAYDEAAILM 53 8*******9.**********8.....556*********************9866 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.16E-32 | 5 | 66 | No hit | No description |
Pfam | PF00847 | 2.6E-12 | 6 | 55 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.863 | 6 | 64 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.9E-32 | 6 | 64 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.3E-39 | 6 | 70 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-18 | 6 | 65 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.2E-10 | 7 | 18 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-10 | 29 | 45 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
MGRPQKYRGV RQRHWGSWVS EIRHPHLKTR VWLGTFETEE DAARAYDEAA ILMCGPHNAK 60 TNFTYDPNAL PSTKPSFLSA ALTANNLRQC YLASLNIEMQ EGTAHKHHLQ SPVMTPSLTC 120 LRLDTEKSNL GIWQKRAGKQ SRSNWVMTVK FDSCSDRDRQ QPALKQETEE DVALEMIEEL 180 LHPTSIEFSS QTDTSYLCNG QALQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT110788 | 1e-131 | BT110788.1 Picea glauca clone GQ03227_P10 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024386105.1 | 6e-62 | ethylene-responsive transcription factor ERF003-like | ||||
Swissprot | Q9XI33 | 3e-46 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A9S984 | 1e-60 | A9S984_PHYPA; Predicted protein | ||||
STRING | EFJ28960 | 4e-60 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 4e-38 | ERF family protein |