PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_52379g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 298aa    MW: 34013.8 Da    PI: 7.5882
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_52379g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.41.4e-321972255
        G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                   prlrWtp+LH++F++ave+LGG +kAtPk +l+lm+vkgLt++hvkSHLQ+YR+
  MA_52379g0010 19 PRLRWTPNLHQCFLNAVERLGGRDKATPKLVLQLMNVKGLTISHVKSHLQMYRT 72
                   8****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.5571575IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.9E-311573IPR009057Homeodomain-like
SuperFamilySSF466891.2E-151773IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-251973IPR006447Myb domain, plants
PfamPF002492.4E-92071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MESCERKGRV RQYIRSKVPR LRWTPNLHQC FLNAVERLGG RDKATPKLVL QLMNVKGLTI  60
SHVKSHLQMY RTEKNNQRSH ESQTQDCQKQ SITDEHLTDN NDGEENLYSD FSKTSTCSSV  120
HSFRTTDKRI WRGETDSFIM ASERSTLDHG NSIEQHPTYS DSAGSHGHIM EEAPTPTDIF  180
NKGNSNCRSQ PSLKGNEVEH LVRLLLWRHE QSKTMDNARE PLRFPSSELQ LTGKLCQGNG  240
KSENENPCHE TVDITDLSLS ISTAYNKMKT SCPRESGLLS SNYNSFRDQN DIKLDLTI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-182074458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-182074458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-182074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-182074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-182074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-182074357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-182074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-182074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-182074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-182074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-182074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-182074458Protein PHOSPHATE STARVATION RESPONSE 1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1128270.0BT112827.1 Picea glauca clone GQ03321_G19 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-32G2-like family protein