PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_504223g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 478aa MW: 52523.5 Da PI: 6.6758 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.4 | 0.00014 | 364 | 402 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L++l+ + +K + a++L +A+ YIk Lq MA_504223g0010 364 RKEKLGDRITALQQLVSPF-----GKTDTASVLLEAIGYIKFLQ 402 677888999*******998.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.674 | 352 | 401 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.96E-11 | 362 | 416 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.58E-6 | 362 | 406 | No hit | No description |
SMART | SM00353 | 0.0056 | 363 | 407 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.9E-8 | 366 | 410 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 478 aa Download sequence Send to blast |
MESTNLDHQN VGDHSGSLID SSVQMGSFGG VPDTHVWRQD FLLDNGSNDQ NMQNLQNNFP 60 PHLTEVLCTS RPLSQDELMN RPSDQSHLTK REEISSGWEL RSHLRSNFQG EDSINVSNNI 120 TAGKQQIPSL PNYSLQLMDD RLQNTCTISD IGSWSLSPSS FTHTGLDMPL LPHYHMANVK 180 EEFIPMANYS TSGVPSRILQ GFAVTEPYKS NESVYSTFLE PHGNKSMAKA QHLGPMIADH 240 HDYNIAGHGF FPPIPSKHSP GVVTFGSSSC MSMPVLDFLA SKPSDIRLQG AHSSSALNYS 300 QDGKSKLHTG PQNRATLQGL GHEGPGTTSE PKRRSSTGHE NTMDASFKRP RMESNSTLPA 360 FKVRKEKLGD RITALQQLVS PFGKTDTASV LLEAIGYIKF LQEQVRVLSM PYLKTGCTST 420 TQGDQKGWGS SEQQESNESK QDLRSRGLCL VPVSCTLHVA NDTIGADFWS PSLGGTYR |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1342 | 13 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.3 | 4e-38 | bHLH family protein |