PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_476980g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 165aa MW: 18730.5 Da PI: 10.7255 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.3 | 9.8e-07 | 107 | 133 | 5 | 31 |
HHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 5 hnerErrRRdriNsafeeLrellPkas 31 h +Er+RR+++ + f+ Lr l+P ++ MA_476980g0010 107 HVVAERKRRAKMGDVFSALRALVPVNP 133 8899********************954 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.05E-7 | 102 | 136 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.693 | 102 | 165 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.6E-6 | 106 | 133 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.17E-5 | 106 | 135 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence Send to blast |
MGIGNSQPAV QLEESIISGP AEEINGNWSR LGFSFNHKRN SSFVGWKSIN PVLPRFCKPQ 60 NYSSLQKRCF RFLNVIKNHK ILGPLSSNEE SSGAVPSNNY NKLAIHHVVA ERKRRAKMGD 120 VFSALRALVP VNPKDNEFEP CWVHEKHRRS SLRDYKTMKG KLSLV |