PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_463250g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 289aa    MW: 31904.8 Da    PI: 6.5208
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_463250g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-1974122355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+Wv+eIr+p++   + r++lg+f+t+e+Aa+a++ a+  l+g
  MA_463250g0010  74 YRGVRRRS-WGKWVSEIREPKK---KSRIWLGSFDTPEMAARAYDVAAFHLKG 122
                     9****887.**********854...6**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-1272122IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.3E-3173132IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-2073132IPR016177DNA-binding domain
SMARTSM003806.4E-3773137IPR001471AP2/ERF domain
PROSITE profilePS5103223.9273131IPR001471AP2/ERF domain
CDDcd000183.96E-3174133No hitNo description
PRINTSPR003672.6E-107485IPR001471AP2/ERF domain
PRINTSPR003672.6E-1096112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MLRRSARLIF CTQKIMDNGT SFVSETMLTS STDTEAISKS ASTDKGAIKR IRRQGDAAPS  60
PPAERTVNPQ NPAYRGVRRR SWGKWVSEIR EPKKKSRIWL GSFDTPEMAA RAYDVAAFHL  120
KGKKRALLNF PELIDHLPHP ISLSPCHIQA AASKAAVAFY SGSAGNSGIL NHDNKRARRS  180
PGKLPVSNEN ATTSSSDGLS AIISSDFETA SAEVSGETDS SNSSSVCRPT EGVGECVAME  240
DDLFEHFNLF TYLAEALMLP PPPLFSIDEV EVEEQKWEEE FLWSDFYRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1865131672Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ABJ63e-92D5ABJ6_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-35ERF family protein