PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_436575g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 191aa    MW: 22010.6 Da    PI: 9.0911
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_436575g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2232e-073657224
             AP2  2 gykGVrwdkkrgrWvAeIrdpse 24
                     y+GVr+++ +g+Wv+eIr+p++
  MA_436575g0010 36 IYRGVRRRR-WGKWVSEIREPRK 57
                    69****777.**********843 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.35136132IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-93660IPR001471AP2/ERF domain
SMARTSM003806.3E-536143IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-63660IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MAEKRFVPNA NDMGELESKR KKRACGEAEG TGSYPIYRGV RRRRWGKWVS EIREPRKKKR  60
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXSSLD PSDIQSAAAE AARAFNAETF  120
SLQSSSFHGS YADQNYYNAL SESLREKLEP DHAENSLHEQ QATTNSASTP CTELELRLHL  180
WWPSKIIQEK L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14159RRRWGKWVSEIREPRKKKR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1106572e-95BT110657.1 Picea glauca clone GQ03225_D09 mRNA sequence.